| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2744 |
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| Symbol | |
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| ID | 5323614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2861322 |
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| End bp | 2863286 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791689 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001328409 |
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| Protein GI | 150397942 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA CCGGCTTTCC ACCACTCGGC GTGACACGGG CAGCCGACGG AACACGCTTT
ACGGTCTGGT CGCATAATGC AGCCCGCATC GATCTCTGCC TGTTCGACGG AGCCGGGATG
GCAGAGCTCA GCCGCCTGCC GATGCTGCGC GATGGCGACG TCCACAGCAT CATTCTGCCC
GACATAGCGC CCGGCACCCG CTACGGCCTG CGCGCCGACG GCGTGTACTC CCCGGATCAT
GGGCTTTGGT TCGATCCGTC GAAGCTTCTG GTCGACCCTT ACGCGGTCGA GCTCGACGGG
CCTTTTCGTC ACGATCCGCG GCTGACGGCC TTCGGCGAAG ACACGGCCGA CCTCGTCCCG
AAAGCAGTCG TCACGGAAGC GAAGACGGTA AAACCCGGGC CTCCACTCTT TTCATCGGGC
GCGCTGATCT ACGAAGTTGC GGTCAAGCCG TTTACGATCC TTCACCCGGG CGTACCGGAA
AAGAAACGCG GCACTGTGGC GGCTCTGGCC GAACCCGCCA TCATCGAACA TCTCACGCGC
CTCGGGGTTT CCGCGGTCGA ACTCATGCCG GTGGTTGCCT GGATCGACGA GCGGCATCTG
CCTCCGCTCG GCCTGCGCAA CGGTTGGGGC TACAATCCGA TTGCGCCGAT GGCTCTCGAT
CCGCGCCTGG TGCCGGGCGG CATCAGGGAA CTGCGCGAAA CCGTAGATGC CCTGCATCAG
GCCGGCATCG GCGTCATCCT TGATCTCGTC TTCAACCATT CCGGCGAGAG CGATCGTTTC
GGCGCCACGC TTTCGATGCG CGGACTGGAC AACCTGACCT ATTATCGCCA TGCCACCGGC
CGGCCGGGCG AACTCATCAA CGACACGGGC TGCGGCAACA CGATCGCCTG CGACCACCCG
GTCGTCCAGC GACTGATCGT CGACAGTTTG CGGCATTTCG TACTTGCCGC CGGCATTGAC
GGTTTCCGCT TCGACCTCGC CTCGATTCTC GGCCGCGACA TGGGTGGCTT CCGCCGCGAT
GCCGCGCTTT TCTCGGCGAT GGCAGCCGAC CCGGTCCTTT GCGACCGCGT GTTCATCGCC
GAGCCCTGGG ACACCGGGCC CGGCGGCTAC CAGCTCGGCA ATTTCCCGCC TCCCTTTCTG
GAATGGAACG ATCGGGCACG CGACGACATC CGCCGCTACT GGCGCGGCGA TCGTCACACG
GTCGGTGCGT TTGCGACAGC GCTCGCCGGC TCCTCCGCCA GCTTTTCTCG ATGGGGCGAG
ACGGACACCC GCAGCCTCAA CTTCATCGCC GCCCACGATG GCTTCACGTT GATGGATCTC
GTCTCCTACG CCCGCAAGCA CAATGAGGCG AACGGCGAGG GTAATCGGGA TGGCCACGAC
GAGAACTTCT CGTGGAACAA CGGTGCCGAA GGTCCGGTAA CGGATCCGGA GATCGCCTCT
TTCCGGCAGC GCGATGTCAT GGCGCTCCTC AGCACTCTCT TCGCCTCGCG CGGTGCAATC
ATGATGAGAG CCGGCGATGA AGGCGGCCAC AGTCAGGGCG GCAACAACAA CGCCTATGCG
CAGGACAATG CCGTGACCTG GCTCGACTGG AGCAAACCGG ACGGCACACT CGTCGAGCAC
TCTGCACGGC TTTCCGCCAT GCGCCGGCGT TTCGGCGTCT TTGCCGAGAC CGCCTTCTTC
ACCGGCATCG ACGATGTCGC CTGGCTATGT CTCGATGGAG AGCCCCTAAC CGTCGAGCAA
TGGGAGCACC CCGCCACCGA CAATCTCGTC ATGATGCTTG CGACCGAAGA TCGCCACCAG
AAAAAAGCCA CCCGGCTTGC CGTGGTCGTC AACCGCAGCC ACGCGCCACA CCCGATCCGG
CTTCCGGCGA ACCTCAAGAA CGAATGGCGC GACGCTCTCT CGGATGGACC GGCACCGGCA
AGCGTACCAG CCCGTTCGGT CACCTTTCTC GTCGAGTTTT TTTAA
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| Protein sequence | MPTTGFPPLG VTRAADGTRF TVWSHNAARI DLCLFDGAGM AELSRLPMLR DGDVHSIILP
DIAPGTRYGL RADGVYSPDH GLWFDPSKLL VDPYAVELDG PFRHDPRLTA FGEDTADLVP
KAVVTEAKTV KPGPPLFSSG ALIYEVAVKP FTILHPGVPE KKRGTVAALA EPAIIEHLTR
LGVSAVELMP VVAWIDERHL PPLGLRNGWG YNPIAPMALD PRLVPGGIRE LRETVDALHQ
AGIGVILDLV FNHSGESDRF GATLSMRGLD NLTYYRHATG RPGELINDTG CGNTIACDHP
VVQRLIVDSL RHFVLAAGID GFRFDLASIL GRDMGGFRRD AALFSAMAAD PVLCDRVFIA
EPWDTGPGGY QLGNFPPPFL EWNDRARDDI RRYWRGDRHT VGAFATALAG SSASFSRWGE
TDTRSLNFIA AHDGFTLMDL VSYARKHNEA NGEGNRDGHD ENFSWNNGAE GPVTDPEIAS
FRQRDVMALL STLFASRGAI MMRAGDEGGH SQGGNNNAYA QDNAVTWLDW SKPDGTLVEH
SARLSAMRRR FGVFAETAFF TGIDDVAWLC LDGEPLTVEQ WEHPATDNLV MMLATEDRHQ
KKATRLAVVV NRSHAPHPIR LPANLKNEWR DALSDGPAPA SVPARSVTFL VEFF
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