Gene Smed_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2715 
Symbol 
ID5323584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2829411 
End bp2829872 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID640791659 
Productheat shock protein Hsp20 
Protein accessionYP_001328380 
Protein GI150397913 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.298562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCACT TTGATTTTTC TCCCCTCTAC CGCTCCACGG TCGGCTTCGA CCGCCTTTTC 
ACCATGCTCG ATAGCCTTGG TCAGCCGGAT CAGTCGCAGA CCTATCCGCC CTATAATATC
GAGCGTACCG GCGAAAATGC CTATCGCATC ACCATGGCTG TCGCCGGATT CGACGAAAGC
GAGCTCTCTG TCGAAGCGCG CGAAAACACA CTGACGATCA AGGGCGAAAA GAGCGAGGAA
AAGGGTGAGG AAACCCAGTT TCTCCATCGC GGTATAGCCA AGCGCGCCTT CGAGCGCCGC
TTCCAGCTTG CCGACCACGT CGAGATCAAG TCCGCTTCTC TGAAGAACGG CCTGCTCCAT
ATCGATCTTC TGCGTGAGAT CCCCGAAACG GCCAAGCCTC GCCGCATCGA GATCAGCGCG
GCAGCCTCGC AGCCGAAGCA GATCGAGGCG CAGACCGCCT AA
 
Protein sequence
MRHFDFSPLY RSTVGFDRLF TMLDSLGQPD QSQTYPPYNI ERTGENAYRI TMAVAGFDES 
ELSVEARENT LTIKGEKSEE KGEETQFLHR GIAKRAFERR FQLADHVEIK SASLKNGLLH
IDLLREIPET AKPRRIEISA AASQPKQIEA QTA