Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2646 |
Symbol | |
ID | 5323515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2749871 |
End bp | 2750452 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791590 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_001328311 |
Protein GI | 150397844 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCCA AGGATTTGAA GGCAGCATTG AGAAAGGAGC GTCTGGCGCT CCGCGATGCG ATGCCGGCGG AAGCGCGGAT CGAGGCGAGC CTTGCAATGG CCGACCACGC AAGCGACGTT ATCGCGCTCG ATCCCGGCCA CGTGGTTTCC GGGTTCTGGC CGATCCGAAC GGAGGCCGAT ATCCGGCCGC TGATGGTGCG GCTGAGGGAT CGTGGTGCAC GCCTCTGCCT GCCGGTGATC CTGGACAAGA AGGCGATCAT CTTCCGGGAA CTGCTCGACG GTATCGCGGT GGTCGAAACC GGCTTCGGCA CCACCGGTCC GGGTCCGGAT GCGCCGGAAG TCGATCCGGA TATCATGCTC GTTCCTCTTT CCGCCTTCGA TGCCATGGGC CATCGGATCG GCTATGGTGC CGGTTATTAT GACCGCGCAA TCGATCGCCT GCGTCGCAAA GGCCACATGC CGCGGTTGAT CGGGATTGCA TTCGACTGCC AGGAAGTGGC ATCAGTGCCG GCCGAACCGC ACGACGTCGC GCTGGATGCG GTATTGACGG AGAGCGGCTT TCGACATTTC AAGGTGAAAT GA
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Protein sequence | MSPKDLKAAL RKERLALRDA MPAEARIEAS LAMADHASDV IALDPGHVVS GFWPIRTEAD IRPLMVRLRD RGARLCLPVI LDKKAIIFRE LLDGIAVVET GFGTTGPGPD APEVDPDIML VPLSAFDAMG HRIGYGAGYY DRAIDRLRRK GHMPRLIGIA FDCQEVASVP AEPHDVALDA VLTESGFRHF KVK
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