Gene Smed_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2646 
Symbol 
ID5323515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2749871 
End bp2750452 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640791590 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001328311 
Protein GI150397844 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCA AGGATTTGAA GGCAGCATTG AGAAAGGAGC GTCTGGCGCT CCGCGATGCG 
ATGCCGGCGG AAGCGCGGAT CGAGGCGAGC CTTGCAATGG CCGACCACGC AAGCGACGTT
ATCGCGCTCG ATCCCGGCCA CGTGGTTTCC GGGTTCTGGC CGATCCGAAC GGAGGCCGAT
ATCCGGCCGC TGATGGTGCG GCTGAGGGAT CGTGGTGCAC GCCTCTGCCT GCCGGTGATC
CTGGACAAGA AGGCGATCAT CTTCCGGGAA CTGCTCGACG GTATCGCGGT GGTCGAAACC
GGCTTCGGCA CCACCGGTCC GGGTCCGGAT GCGCCGGAAG TCGATCCGGA TATCATGCTC
GTTCCTCTTT CCGCCTTCGA TGCCATGGGC CATCGGATCG GCTATGGTGC CGGTTATTAT
GACCGCGCAA TCGATCGCCT GCGTCGCAAA GGCCACATGC CGCGGTTGAT CGGGATTGCA
TTCGACTGCC AGGAAGTGGC ATCAGTGCCG GCCGAACCGC ACGACGTCGC GCTGGATGCG
GTATTGACGG AGAGCGGCTT TCGACATTTC AAGGTGAAAT GA
 
Protein sequence
MSPKDLKAAL RKERLALRDA MPAEARIEAS LAMADHASDV IALDPGHVVS GFWPIRTEAD 
IRPLMVRLRD RGARLCLPVI LDKKAIIFRE LLDGIAVVET GFGTTGPGPD APEVDPDIML
VPLSAFDAMG HRIGYGAGYY DRAIDRLRRK GHMPRLIGIA FDCQEVASVP AEPHDVALDA
VLTESGFRHF KVK