Gene Smed_2609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2609 
Symbol 
ID5323478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2704955 
End bp2705554 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID640791553 
Producthypothetical protein 
Protein accessionYP_001328274 
Protein GI150397807 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA TGACAAAGAC GACCTTGATG GCTGTCCGCG CTATTGCGAC CATGATCCTG 
ACGGTCAGCA CCCTGATTGC CGGCATCTCG ATCACTCAGG CGCAATCCCA AAACACGAGC
CAGTACACCA TGCAGGAAAT CGTCGATGCC GGCCACGGCT TCTTCGGCGA AACCTCCGGC
GGTCTCGCCA AGGTCGTCGA ACGGGCCTTC GAGCGTTATG GTCTGCCCAA TGGCTATATC
CTCGGCCAGG AAGGATCCGG CGCCTTCATC GCCGGCGTCA CCTATGGCGA GGGCGAGCTC
CATACCAAGA ATGTGGGGCA GCACAGCGTC TTCTGGCAGG GTCCGTCTCT TGGGCTCGAC
TGGGGCGGTC AGGGCAGCCG CGCCATGATG CTCGTATACA ATCTGCCGAG CGTCCCGGCG
CTCTACAAGC GCTTCGGCGG CGTTTCCGGC TCGGCCTACG TGGTCGCGGG CGTCGGTATG
ACGGTGCTGA CCGACGAGCA AGTCGTGGTC GTGCCGATCC GCACCGGCAT CGGCGCCAGA
CTGGGAATCA ATGTCGGCTA TCTCAAGCTG ACGCAACAGC CCACCTGGAA CCCCTTCTGA
 
Protein sequence
MQPMTKTTLM AVRAIATMIL TVSTLIAGIS ITQAQSQNTS QYTMQEIVDA GHGFFGETSG 
GLAKVVERAF ERYGLPNGYI LGQEGSGAFI AGVTYGEGEL HTKNVGQHSV FWQGPSLGLD
WGGQGSRAMM LVYNLPSVPA LYKRFGGVSG SAYVVAGVGM TVLTDEQVVV VPIRTGIGAR
LGINVGYLKL TQQPTWNPF