| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2518 |
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| Symbol | |
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| ID | 5323385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2613792 |
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| End bp | 2616503 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791460 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001328183 |
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| Protein GI | 150397716 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGTC TCGGCGGCTT TGCCCGCAAG TTGTTTGGTT CGGCCAACGA TCGCCGCGTT
CGCGGCTACA AGGGCCGGGT GGACGCCATC AATGCTCTCG AAGCCGAAAT GAAGGCCCTG
AGCGACGAGG CCCTTGCGGC GAAGACGGCG GAATTTCGTC GTGAAATCGC CGACGGAAAG
TCATTGGACG ACATTCTCGT GCCGGCCTTT GCAGTCGTGC GCGAGGCTGC GCGCCGCGTC
CTCGGGCTGC GCCCCTTCGA CGTCCAGCTG ATTGGCGGCA TGATCCTGCA CGAGCGCGCC
ATCGCGGAAA TGAAGACCGG CGAAGGCAAG ACGCTCGTCG CCACCCTTCC CGTCTATCTC
AACGCGCTCG CCGGCAAGGG TGTGCACGTG GTCACCGTCA ACGATTACCT CGCCCAGCGC
GACGCCGGCA TGATGGGCCG CATCTACGGC TTCCTCGGCA TGTCCACAGG CGTTATCGTC
CACGGCCTCT CCGACGAGCA GCGCCGCGAC GCCTATGCCT GCGACGTCAC CTATGCGACG
AACAACGAGC TCGGCTTCGA TTATCTGCGC GACAACATGA AGTACGAACG CTCCCAGATG
GTGCAGCGCG GCCACTTCTT CGCGATCGTC GACGAAGTGG ACTCGATTCT GGTGGACGAA
GCACGCACGC CTCTCATCAT CTCCGGGCCG CTTGACGACC GTTCCGACCT CTACAACACC
ATCAACGAGT TCATTCCGCG CCTGTCTCCG GAAGACTACG AGATCGACGA AAAGCAGCGC
TCGGCCAACT TCTCGGAGGA CGGCACCGAG AAACTCGAAA ACATGCTGCG TGAGGCGGGC
CTGTTGAAAG GCGAGTCGCT CTACGACATC GAGAACGTGG CGATCGTTCA CCACGTCAAC
AACGCGCTCA AGGCCCACAA ACTGTTCACG CGCGACAAGG ACTATATCGT GCGAAACGGC
GAGATCGTCA TCATCGACGA GTTTACCGGT CGCATGATGC CGGGCCGCCG CTACTCCGAA
GGGCAGCACC AGGCACTCGA AGCCAAGGAG AAGGTGCAGA TCCAGCCCGA GAACCAGACA
CTCGCCTCGA TCACCTTCCA GAACTATTTC CGCATGTACG ACAAGCTGGC CGGGATGACC
GGTACTGCGG CGACGGAAGC GGAGGAATTC GGCAACATCT ACGGCCTCGA AGTGCTCGAG
GTGCCGACCA ACCTGCCGAT CAAGCGCATC GACGAGGACG ACGAGGTCTA TCGTACCGTC
GGCGAAAAAT TCAAGGCGAT TATCGAAGAG ATCAAATCCG CGCATGAGCG CGGTCAACCG
ATGCTCGTCG GCACAACCTC CATCGAGAAG TCAGAGCTTC TCGCCGAAAT GCTGAAGAAG
GACGGGTTTT CGAAGTTTCA GGTGCTGAAC GCCCGATATC ACGAGCAGGA AGCCTTTATC
GTCGCGCAGG CCGGCGTTCC GGGCGCCATT ACGATCGCCA CCAATATGGC CGGCCGCGGT
ACCGACATCC AGCTTGGCGG CAACCCCGAC ATGCGCATTC AGCAGGAACT GAGCGACGTC
GAACCCGGTG CCGAGCGCGA ATCACGCGAA AAGGCGATCC GCGAAGAGGT TCAAGTGCTC
AAGGAAAAGG CTCTCGCCGC GGGGGGGCTT TACGTTCTTG CCACAGAACG GCACGAAAGC
CGACGCATCG ACAACCAGTT GCGCGGCCGC TCCGGCCGTC AGGGAGACCC GGGCCGCTCC
AAATTCTACC TGTCCCTTCA GGACGATCTG ATGCGCATCT TCGGCTCCGA CCGTATGGAC
GGCATGCTGC AGAAGCTCGG CCTGAAGGAA GGCGAGGCGA TCGTTCACCC CTGGATCAAC
AAGGCGCTCG AACGCGCCCA GAAGAAGGTC GAGGCGCGCA ACTTCGACAT CCGCAAGAAC
CTCCTGAAAT ACGACGACGT GCTCAACGAC CAACGCAAGG TCATCTTCGA GCAGCGCATC
GAACTGATGG ATGCGGAGAG CGTCACCGAT ACGGTGACCG ACATGCGCAA CGAAGTGATC
GAGGAAGTGG TCGCGAAGCG GATTCCGGAG CGTGCCTATG CCGAGAAATG GGATGCGGAG
GGACTGAAGG CCGACGTCCA GCAATATCTC AATCTCGACC TGCCAATCGT CGAATGGGTT
GCCGAAGAAG GCATCGCCGA GGATGATATC CGCGAGCGCA TCACCGCCGC TGCGGACCAA
GCGGCGGCCG ATCGCGCCGA GCGTTTCGGT CCCGAGGTCA TGCAATATGT TGAGCGTTCG
GTCATTCTTC AGACGCTCGA CCATCTCTGG CGCGAGCACA TCGTAAACCT CGACCATCTG
AGATCGGTGA TAGGCTTCCG CGGATACGCC CAGCGTGACC CGTTGCAGGA ATACAAGTCC
GAGGCTTTCG AGCTGTTCCA GGCGCTCCTC GGCAATCTGC GCCAGGCAGT GACGGCACAG
CTGATGCGCG TCGAGCTGGT TCGCGAAGCT CCCGAGGAGC CTCAGCCCCT GCCGCCGATG
CAGGCGCACC ACATCGATCC CTTGACAGGC GAGGACGACT TTGCGCCCGC AGGCGACACT
TTGCTGGCGG TCGCCCCCAC GACCCGCGAC CCGGCCGACC CGTCGACCTG GGGCAAGGTC
TCGCGCAACG AAGCCTGCCC CTGCGGCTCC GGCAAGAAGT ACAAGCATTG CCACGGCGTA
TACGAGGCTT GA
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| Protein sequence | MVSLGGFARK LFGSANDRRV RGYKGRVDAI NALEAEMKAL SDEALAAKTA EFRREIADGK
SLDDILVPAF AVVREAARRV LGLRPFDVQL IGGMILHERA IAEMKTGEGK TLVATLPVYL
NALAGKGVHV VTVNDYLAQR DAGMMGRIYG FLGMSTGVIV HGLSDEQRRD AYACDVTYAT
NNELGFDYLR DNMKYERSQM VQRGHFFAIV DEVDSILVDE ARTPLIISGP LDDRSDLYNT
INEFIPRLSP EDYEIDEKQR SANFSEDGTE KLENMLREAG LLKGESLYDI ENVAIVHHVN
NALKAHKLFT RDKDYIVRNG EIVIIDEFTG RMMPGRRYSE GQHQALEAKE KVQIQPENQT
LASITFQNYF RMYDKLAGMT GTAATEAEEF GNIYGLEVLE VPTNLPIKRI DEDDEVYRTV
GEKFKAIIEE IKSAHERGQP MLVGTTSIEK SELLAEMLKK DGFSKFQVLN ARYHEQEAFI
VAQAGVPGAI TIATNMAGRG TDIQLGGNPD MRIQQELSDV EPGAERESRE KAIREEVQVL
KEKALAAGGL YVLATERHES RRIDNQLRGR SGRQGDPGRS KFYLSLQDDL MRIFGSDRMD
GMLQKLGLKE GEAIVHPWIN KALERAQKKV EARNFDIRKN LLKYDDVLND QRKVIFEQRI
ELMDAESVTD TVTDMRNEVI EEVVAKRIPE RAYAEKWDAE GLKADVQQYL NLDLPIVEWV
AEEGIAEDDI RERITAAADQ AAADRAERFG PEVMQYVERS VILQTLDHLW REHIVNLDHL
RSVIGFRGYA QRDPLQEYKS EAFELFQALL GNLRQAVTAQ LMRVELVREA PEEPQPLPPM
QAHHIDPLTG EDDFAPAGDT LLAVAPTTRD PADPSTWGKV SRNEACPCGS GKKYKHCHGV
YEA
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