Gene Smed_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2416 
Symbol 
ID5323277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2493827 
End bp2495194 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID640791354 
Productglutamine synthetase catalytic region 
Protein accessionYP_001328083 
Protein GI150397616 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.175652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG ATGTGGACGA CACGGAAGCC TTTCAGGCCT GGATCGATCA GAACGGCCCG 
ATAGAGAGTA TTCAGGCGGT CATTTGCGAC CTGAACGGGA TCATGCGCGG CAAGCGCGTG
CCGGTGGAGC AGGCCGCGAA GGTGCTCGGC GGCGGTATCC GCATGCCGCT TTCGATCGTC
GGCGTCGACG TTTGGGGCGA GGACATCATC GGCAGCGAAC AGGTCTTTGC GACCGGCGAT
CGCGACGGCA TCTGCGGTGT GACCGGGCGA GGGGCCCTGC CGGTCAACTG GACGTCGCGG
CCGAGCGCGC TGGTTCCGCT ATGGCTCTTC GTAGAGGACG GCAGACCCTT TCTCGCCGAC
CCGCGGCAGG CCCTCGCGGC AATCGTGCGC GAATATCGCG AACTGGGCCT TCGCCCGGTG
GTGGCGACGG AGCTTGAATT TTACCTCATA GATCCGGAGC CGGACAGCGC CGTCCCGCCG
ATCTCGCCTT ATACCGGCAA GCGGCTCGAT TCCGACGCTA TCCTTTCGAT CGACGAGCTC
GACGACTTCG GCGAGTTCTT CTCCGACGTC TACAGGGAGT GCGCGCGGCA GAACGTTCCG
GCGGATGCGG CGATCGCGGA GAACGGCATC GGCCAGTTCG AGATCAATCT GCTGCACAGC
GACGATCCCC TGAAGGCGGC GGACGATGCG ATCTTCTTCA AGCGTATCGT CAAGGGCGTC
GCCCGCAAGC ACGGTCTCGC CGCCACCTTC ATGGCGAAGC CCTACGGCAC CCGCTCCGGC
AACGGCATGC ACATTCATTT CAGCCTGCTC GACGAGGAGG GCAACAACGT CTTCGATGAT
GGCAGCGACG AGGGGGCGGC CGTGCTCAAA CATGCGGTGG CCGGCCTCCT GCGCGGAATG
GCCGAGACGA CGCTGATGTT CGCCCCGCAT TTCAATTCCT ACCGGCGGCT GCGGCCCGAC
ACGCATGCGC CGACCTCGAT TTCCTGGGGC TACGAGAACC GCACCTCGGC AATCCGCATC
CCGGGGGGCA ATCCGGCGGC GCGGCGGATC GAACACCGCG TCGCCGGTGC GGACGCCAAC
CCCTATCTCG TCATTGCCGC TATCCTTGGA GCGGCGCTAG TCGGCATCCG CAACAAGTGG
AAACCGCCGG TGCCGGTCGA GGGGCGTGCC TATGCGACCG AGCGGCTGCC CAAGATACCT
GCCGACTGGG GGCAGGCGGT CGACGCCTTC GAGGCCGGCC CGATCGCCGC CGAGATATTC
GATCCCGTGC TTCGCTCCAT GCTGATCGCC TGCAAGCGCC AGGAGATCGC CGGCTTCGCC
GAGCAGGTCA CGGACTACGA GTTTAGCGCC TATCTGGAAA TCGTCTAA
 
Protein sequence
MSFDVDDTEA FQAWIDQNGP IESIQAVICD LNGIMRGKRV PVEQAAKVLG GGIRMPLSIV 
GVDVWGEDII GSEQVFATGD RDGICGVTGR GALPVNWTSR PSALVPLWLF VEDGRPFLAD
PRQALAAIVR EYRELGLRPV VATELEFYLI DPEPDSAVPP ISPYTGKRLD SDAILSIDEL
DDFGEFFSDV YRECARQNVP ADAAIAENGI GQFEINLLHS DDPLKAADDA IFFKRIVKGV
ARKHGLAATF MAKPYGTRSG NGMHIHFSLL DEEGNNVFDD GSDEGAAVLK HAVAGLLRGM
AETTLMFAPH FNSYRRLRPD THAPTSISWG YENRTSAIRI PGGNPAARRI EHRVAGADAN
PYLVIAAILG AALVGIRNKW KPPVPVEGRA YATERLPKIP ADWGQAVDAF EAGPIAAEIF
DPVLRSMLIA CKRQEIAGFA EQVTDYEFSA YLEIV