| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2411 |
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| Symbol | |
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| ID | 5323272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2487036 |
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| End bp | 2488052 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791349 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001328078 |
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| Protein GI | 150397611 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.119065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGAGCC GCCTGCCCCC GCTGAACCCG CTTCGCGCCT TCGAGGCAAC GGCCCGGCGC
GGCTCCGTTT CCGCCGCGGC GCGTGAGCTC AACGTCACCC ACGGGGCCGT CAGTCACCAG
ATCCGCGCGC TCGAAGCTTC CTTCAACGCG CCCCTTTTCG AGCGTGGGGG CAAGAGATTG
AAGCTGACGC CGCAGGGTGC ATTGCTTCTG CCGGCGGTCA CGCATGCCTT CGCCGAAATC
GCAGCCGCGA CAGCGGCGAT GACGCGGCCT GCGACCAGCG GCGAGCTTAC CGTCACCTGC
GTCCCGGCAT TGCTCTCCTT CTGGATGATC CCCCGTCTGC ACCTCTTCAC CGAGCAGTTC
CCCGATGTCC AGTTGAGGCT GATCGCCTCC AATGACGAGG CTCACCTCGA TTCCCCCGAC
GTCGATGTCT GCCTTCTCTA TGGGGACGGC AACTGGCAGG ATTGCTGGGC AAGGCTCTGG
AGCCGGCTCG CGCTTTTTCC GGTCGTCAGC CCGACGCTTC TCAATATGAG ACCGCTGCGC
TCCATCCGGG ACTTGCGGGA CCACGTGATG CTGCATGGCG ACGACGGCCG CGAATGGAAC
ACCTGGCTCG CTGCAGCCGA CGCGACCGAC CTGCAGCGCG GCCGCCAGCA TTTCATGAGC
GATGCACGCC TTTCGACCGA GGCGGCGCTC CACAATCAGG GCGTTGCGCT CGGCGACACA
ATCACCGCCG GCAGCCTGAT CGCCCGCGGC GAGTTGATCG CCCCCTTCGA CCTGACGGTT
CCGGCCAATG ACGCCTTCTT CATTGCCTGC CGCAACGAGG TGCGCGCCGC GCCGATCGTG
CGCGTTTTCA TCGACTGGCT TTTTGCCGCA CTCGAAAGCG ACCCAATGCC GGAGTTGCAG
ATATCCGCCC GCACGGTTAT CCGCAGCCGT GTACCCAAGC CGGAGAGTAT TCAACACGTT
TCCTCGCCGC GCAGCCAGCG CATCGAACGG CCGCAAAAGC GCAGGTTGAA GTCATGA
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| Protein sequence | MSSRLPPLNP LRAFEATARR GSVSAAAREL NVTHGAVSHQ IRALEASFNA PLFERGGKRL
KLTPQGALLL PAVTHAFAEI AAATAAMTRP ATSGELTVTC VPALLSFWMI PRLHLFTEQF
PDVQLRLIAS NDEAHLDSPD VDVCLLYGDG NWQDCWARLW SRLALFPVVS PTLLNMRPLR
SIRDLRDHVM LHGDDGREWN TWLAAADATD LQRGRQHFMS DARLSTEAAL HNQGVALGDT
ITAGSLIARG ELIAPFDLTV PANDAFFIAC RNEVRAAPIV RVFIDWLFAA LESDPMPELQ
ISARTVIRSR VPKPESIQHV SSPRSQRIER PQKRRLKS
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