| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2400 |
|---|
| Symbol | |
|---|
| ID | 5323261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2475596 |
|---|
| End bp | 2476348 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640791338 |
|---|
| Product | CRP/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001328067 |
|---|
| Protein GI | 150397600 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0375093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCG AAGGAAAGTT TAGCAAAGGC ACGCCCTGCA AAGAGTGTCC CTTGCGCCCG
CTGCCGCTGT TCCGGTCCTT CGAGGCCGAA GAAATTGCAT TCGTCTCCCG TTTCAAGATC
GGCGAACTCG TCTTTGACTC AAATGCGATG ATTCTCGCTG AGGGAGAGGA GAGCGAACAC
CTCTTTACCG TGCTTTCCGG TTGGGGGTTT CGCTACAAGA TGCTGGATGA CGGGCGGCGG
CAGATCATGA ACTATGTCAT GCCCGGCGAC ATTGTGGGGC TGCAGGGCAC CCTGATGGGC
GAGATGCAGC ATTCGATCGA GTCGCTTTCG CCCGTGGTGC TCTGCGTTTT TCAGCGCAGC
AAGCTCGCCG AGCTTTACAG GTGCCATCCG GAACTGGCCT ACGACCTGAC CTGGATCGCA
GCGCGCGAGG AGCGTATGCT GGACGAAAAT CTGCTGAGCA TCGGCCGCCG ATCCGCTCTG
GAAAGGGCCG CCTATCTCAT TGCCTTCCTG TACCAGAGGG CTGCGAGCCT TGAACTCTTT
CGCAGCGGCT GGAGCGTCAT TCCCATCACA CAGCAACATG TGGCCGACAC GCTGGGGCTC
TCGCTCGTCC ACACCAACAA GACGCTGAAG AAGCTGGCCG CCAGAGGTCT GCTGCGCTGG
GCCGAGAAGG GCTGCGACGT CCATGACATC GACGGCTTGC TTGCGGTTGC GGGCTGGGAC
GGATTGTGCG AACCGAAGAG GCCGCTGATC TGA
|
|---|
| Protein sequence | MITEGKFSKG TPCKECPLRP LPLFRSFEAE EIAFVSRFKI GELVFDSNAM ILAEGEESEH
LFTVLSGWGF RYKMLDDGRR QIMNYVMPGD IVGLQGTLMG EMQHSIESLS PVVLCVFQRS
KLAELYRCHP ELAYDLTWIA AREERMLDEN LLSIGRRSAL ERAAYLIAFL YQRAASLELF
RSGWSVIPIT QQHVADTLGL SLVHTNKTLK KLAARGLLRW AEKGCDVHDI DGLLAVAGWD
GLCEPKRPLI
|
|---|
| |