Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2356 |
Symbol | |
ID | 5323217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2431813 |
End bp | 2432643 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640791294 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328023 |
Protein GI | 150397556 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA ATGTTTCCAC CGGGCGGAAG CTCATTACCA CCGTGGTGGC CTGGACGATC GGAATCCTCA TCTTTTTCCC GATCCTCTGG ACATTCCTGA CGAGCTTCAA GACGGAAGCC CAGGCGATTG CTTCGCCGCC GGTCTTCCTC TTCTTCGACT GGACGACCGA AAACTATGCC GAGGTGCAGA GCCGGTCGGA CTATCTGAAG CACTTCATGA ATTCGGTGAT CGTTTCCTTC GGCTCGACGC TGCTGGGCCT GCTGATCGCG ATCCCCTCGG CCTGGGCGAT GGCATTCTCG CCGACGAAGC GCACCAAGGA CGTGCTGATG TGGATGCTCT CCACAAAGAT GATGCCGCCC GTCGGCGTGC TGGTGCCGAT GTATCTGATA TTCCGCAACT GGGGCCTGCT CGACACACGG ACGGGATTGG TGATCGTGCT GACGCTGATC AATCTGCCGA TCATCATCTG GATGCTCTAC ACCTATTTCA AGGAGATTCC GGGAGAAATC CTCGAAGCGG CGCGTATGGA CGGCGCATCG CTCTCCAAGG AGATCATCTA TGTGCTGACG CCGATGGCGA TCCCGGGGAT CGCCTCGACG CTGCTCCTCA ACATCATCCT TGCCTGGAAC GAGGCGTTCT GGACCCTGAA CCTGAGTGCT GCGAAGGCGG CACCGCTCAC CGCCTTCATC GCCTCCTATT CGAGCCCTGA AGGACTCTTC TATGCGAAGC TCTCGGCGGC CTCGACGATG GCGATCGCCC CCATCCTCAT TCTCGGCTGG TTCTCGCAAA AACAGCTCGT ACGCGGTCTC ACTTTCGGCG CGGTCAAATA G
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Protein sequence | MARNVSTGRK LITTVVAWTI GILIFFPILW TFLTSFKTEA QAIASPPVFL FFDWTTENYA EVQSRSDYLK HFMNSVIVSF GSTLLGLLIA IPSAWAMAFS PTKRTKDVLM WMLSTKMMPP VGVLVPMYLI FRNWGLLDTR TGLVIVLTLI NLPIIIWMLY TYFKEIPGEI LEAARMDGAS LSKEIIYVLT PMAIPGIAST LLLNIILAWN EAFWTLNLSA AKAAPLTAFI ASYSSPEGLF YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK
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