| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2307 |
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| Symbol | |
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| ID | 5323168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2386897 |
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| End bp | 2387946 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791245 |
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| Product | ABC transporter related |
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| Protein accession | YP_001327974 |
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| Protein GI | 150397507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.77844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CCGTCATTTT CAAGAATGTC GACATCATCT TCGGCAAAAA TCCGCAGATC
GCAACGCAAA TGGTCGATCA GGGCAAGACG CGGGACGAGA TCGGTGCTGC CACCGGGCTG
GTCCTGGGGG TCGCCGGCGC TTCGCTGACC ATCAACGAGG GCGAGATTCT CGTTCTGATG
GGGCTGTCCG GTTCCGGCAA GTCGACGCTG CTCAGGGCCG TCAACGGCCT TGCGCCGGTT
GTGCGCGGCG AGGTCGAGGT GAAGACCGGG AACGGGGCTC TCAACCCTTA TCGCTGCAAC
GCCAAGTCTC TGCGGGACTT CCGCATGCAT ACGGTCTCGA TGGTGTTCCA GCAGTTTGCC
CTTCTGCCGT GGCGAAGCGT GGCGGACAAT GTCGGTTTCG GGCTCGAATT GGCAGGCGTA
GCCGATGCCG AACGGCGCAA GCGCGTCGAC GAGCAGCTTG AACTCGTCAA TCTTACGCAA
TGGGCGGATC GCAAGGTCAA CGAACTCTCA GGCGGCATGC AACAGCGCGT CGGCCTTGCC
AGGGCCTTTG CCACCGGAGC CCCTATCCTT CTGATGGACG AACCGTTCTC GGCACTCGAC
CCGCTGATCC GCACACGCCT TCAGGACGAA TTGCTCGAAT TCCAGCGGCG GTTAAAAAAA
ACGATCATCT TCGTCAGCCA CGACCTCGAC GAGGCCTTCC GCATCGGCAA CCGGATCGCC
ATCATGGAAG GTGGAAGAAT CATCCAGTGC GGAACGCCGC AGGAGATCGT GAGGAGCCCG
GCAAACCAGT ATGTCGCCGA TTTCGTCCAG CACATGAATC CGATTTCGAT GCTGACGGCG
AAGGATGTGA TGCAGAGCGG TGTCGGGCGA ACCGCTGCAA GTACCGGCGT CACGGCGACC
GCAAAGCCAA CCACGCCACT CGTCGATATT CTCGATGCCA TGTCGCGCCA GCCGGGCAGC
ATAGGTGTGG TCGACAACGG CGCGGTCGTC GGTACTATCG ACGCGCAGAA CATCGTCGAG
GGACTGACGC GCCACCGCAG CAAAAACTGA
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| Protein sequence | MTDAVIFKNV DIIFGKNPQI ATQMVDQGKT RDEIGAATGL VLGVAGASLT INEGEILVLM
GLSGSGKSTL LRAVNGLAPV VRGEVEVKTG NGALNPYRCN AKSLRDFRMH TVSMVFQQFA
LLPWRSVADN VGFGLELAGV ADAERRKRVD EQLELVNLTQ WADRKVNELS GGMQQRVGLA
RAFATGAPIL LMDEPFSALD PLIRTRLQDE LLEFQRRLKK TIIFVSHDLD EAFRIGNRIA
IMEGGRIIQC GTPQEIVRSP ANQYVADFVQ HMNPISMLTA KDVMQSGVGR TAASTGVTAT
AKPTTPLVDI LDAMSRQPGS IGVVDNGAVV GTIDAQNIVE GLTRHRSKN
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