| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2289 |
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| Symbol | |
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| ID | 5323150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2365456 |
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| End bp | 2366043 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791227 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001327956 |
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| Protein GI | 150397489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.622471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.216425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAACG ACGACGATCA GGAAGAAAAG AAGACCGAAT TGCCCTTGGG CAAGGAAACG
GAGGCGAACC TTTTCAAGTC GCGTTCGATT TTCATTTACG GGAACATCAC CCAGGAACTC
GCGCAGAAGG TCTGCTCGCA GCTCGTGGCT CTCGCCGCGG CCAGCGATGA CGACATCCGC
ATCTTCGTCA ACTCGCCCGG CGGCCATGTC GAATCGGGCG ACAGCATCCA CGACATGATC
AAGTTCGTGA AGCCGAAGGT CTGGACGATC GGTACCGGAT GGGTCGCTTC CGCTGGCGCA
CTCATCTATG TCGCCGCCCC CAAGGAACAG CGGCTGTGCC TGCCGAATAC CCGCTTCCTT
TTGCACCAAC CGTCGGGCGG CACACGTGGC ATGGCCTCCG ATATCGAGAT TCAGGCGCGC
GAAATCATCA AGATGAACGA GCGTCTGAAC CGGATCTTCT CCGAAGCGAC CGGTCAGCCC
GTCGAGAAAA TCGCCAAGGA CACCGATCGC GACTACTGGC TCGGTGCGGA AGAGGCGAAG
GCGTATGGGC TCGTCTCGCG CATCGTCACC TCCATCGCGG AAATCTAA
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| Protein sequence | MRNDDDQEEK KTELPLGKET EANLFKSRSI FIYGNITQEL AQKVCSQLVA LAAASDDDIR
IFVNSPGGHV ESGDSIHDMI KFVKPKVWTI GTGWVASAGA LIYVAAPKEQ RLCLPNTRFL
LHQPSGGTRG MASDIEIQAR EIIKMNERLN RIFSEATGQP VEKIAKDTDR DYWLGAEEAK
AYGLVSRIVT SIAEI
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