| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2277 |
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| Symbol | |
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| ID | 5323138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2352475 |
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| End bp | 2355288 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791215 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327944 |
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| Protein GI | 150397477 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.30304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.933566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCA GCCTCTCCTT CATCTTTGCG AACCCGGCAA TATTGGCGGC ACTCATCGCA
CTGCCGGTGA TCTGGTGGCT GCTGCGCATG ACGCCGCCAC GGCCGGCCGC CGAGATCTTT
CCGCCGCTGC GCATCCTTGC TTCGGTGATG AAGCGGGAGG AGACGCCCTC GAAAAGCCCC
TGGTGGCTGA CGCTTCTCAG AATGCTGATG GCGGCGGCCG TCATTTTCGC GATAGCCGAC
CCCGTTTTCA ATCCGCGCAG CAATACGCTC GCAACCTCCG GACCTCTGGC ACTGCTGATC
GACAACGGTT GGGCGACGGC GCCCGACTGG GAGCGGCGTG TCGAAACGGC CTCGGCGCTG
ATCGACGACG CCGAATCGAG GGACGTCGCG ATTTCGGTCG TCTTCACCGG AGAGCGTCAG
CACGATGCGA CCCCCGGCTC GGCGAGCGCA GCGCGCAACA GGCTTGCTGC GGCTAGGCCC
GAGCCTCTGC CTGCCGACCG GGCATCCGCG ATCGCAGCCT TGCAAACGGC CTTCGAGGAC
GCCCCTCCAG CTACCCTGGC CTTCATCACA GACGGCATCG CAAGTGGCGA CGGTAAAACG
ATGGAGAGGC TGGCGGCGAT GGGCGCGTCC AATCTCAAGG TGATCGAGGC GGACGGCAGC
GAGGCGGTGG CGCTTACCGC GACGAGCAAC GAGTCCGGCG GCATGGCTGT GACGGCGAGC
CGGCTGAAGA CAGACGACGG CCGATCTCTG CCCATCGTCG CCTTCGATAC GCGTGGCCGC
GCGATTGCCA GCGGAACGAT CGACTTCGCA CCCGGTGCGG CGACGGCCAG GGGGACGATC
GAAGCCCCGT TCGAACTGCG CAACGATTTC GCCCGAATCG GCATCGAAGG AGCAGCAACG
GCCGGCGCCC AGCATCTCCT CGATGACGGC TTCCGACGCC GGCGCGTGGC GCTGTTGAGC
GGCGAGGCAC GCGACCTGTC GCAGCCCTTG CTCTCGCCGC TTTACTATAT CAACCGGGCG
CTCGCCCCTT ATGCGGACCT GATCGAGCCC CGCCAGAACG ACCTCGCCGT TGCGATCCCG
GAACTCCTGG AGCAGCGCCC GTCGGTCCTG ATCATGGCCG ACATTGGCAG GCTGCCGGAA
GAGACGTATC CCCTGCTTGC AAAATGGATC GAAAACGGCG GCACGCTGAT CCGCTTCGCC
GGCCCGCGCC TCGCCGCCGC ACCAGCCGAC GATCCGCTCG TCCCGGTCAC GCTTCGGCAG
GGTGAGCGTG CGCTCGGCGG CGCGCTCTCC TGGTCAGAAC CGCAGCCGCT CGCGGATTAT
CCGGGCAACA GCCCGTTTGC CGGCATGGCA CGCCCGACCG ACATTCTCGT CAAGCGGCAG
GTTCTCGCCG AGCCTACGGC CGATCTGGCC GAGCGCACAT GGGCAAATCT CGCCGACGGC
ACACCGCTCG TCACGACGGC GGTGCGCGGC ACGGGCCGGA TCGTGCTCTT TCACGTCAGC
GCCGAGGCCA CATGGTCGAA CCTGCCGATA TCAGGGCATT TCGTTGAGAT GCTCCGGCGC
AGCGTCCAGC TTTCGCGGGG CGGCGGCATT GCAAGCGACG GGAAGGCCGT AAAGGCCCAG
ACCTTGCCGC CCTACCGGCT GCTGAACGCG GACGGAGTGC TCATCGCCGA GACCGGCAAT
GTCCGGCCGC TTGAGATCGT GCCGGGGAAG CCACCGGTCG CAACAGCCGA TAACCCTCCG
GGGCTTTACG GCTCGGAAGA CGGCTTTACG GCACTGAACC TCCTGCCGCG CGACGCGGAG
CTCAAGCGGA TCGACATGAC CGCCGCCGGC CCTCACACCT CCGAGCGCTT GACTGGTGTC
GAAAGCTGGT CGCTGAAGCC GGCCCTGATG ACGATCGCGC TGCTTCTGTT GCTTGCGGAC
GCACTGATCG TCCTCTTCAT GGGCGGAGTC TTTTCGCGCG CGCGGATAGC AAGGGCCGCT
TCGGCAATCA TCGTCGTTCT CGCCGGGGCC TTCGTCCTCG CCCCGCCGCA TGCCTTTGCC
GACGACGCAC GCCCGGACGA TCAACGTATC CTCGAGCGGC TGGACACCAC ACATCTCGCT
TATGTCGTCA CCGGCGAAGA GGACGTAGAC CGCCTCTCCG AAAGCGGATT GAGAGGGCTT
ACCGATTTCC TGACCTATCG CACCACGCTC GAGCCCGGGG CACCCGTCGG CCTCGATATA
ACCAAGGACG AGTTGAGCCT GTACCCGATC ATCTATTGGC CGATTTCCGC CACTGCTCCA
ATGCCGTCCC CGCAAGCCGT CAGCCGCGTC GACGCCTATA TGCGCGCGGG CGGCACGGTT
CTGTTCGACA CGCGAGATCA GTTTTCCTCG CTCGGCTCCT CATCGAACGG CACCAGCCAG
AACACCGAAC GCCTCCAGGC TATCCTCGGC AATCTCGACA TACCGCCGCT GGAGCCGGTT
CCAGCCGATC ATGTCCTGAC CAAGGCCTTT TATCTGCTGA CGAACTTTCC CGGCCGCTAT
ACAGGCAGCC CACTCTGGAT CGAGGCGCAG CTGGACAATG GCGAGGAGAC GAGCAACCGG
CCGGCGCGGC CTGGCGACGG TGTGACGCCC ATCATGATCA CCGGCAACGA CCTTGCCGGC
GCATGGGCGG TCGACTCGAA CGGAGTCGCT CTGCTGCCGA CCGTGCCGCC GGACGAAATG
CAGCGTGAAT ACGCCTTCCG CTCCGGCGTC AACATCATGA TGTATATGCT GACCGGCAAC
TACAAGGCCG ATCAGGTGCA CGTGCCCGCG CTGCTCGAGC GGCTCGGACA ATGA
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| Protein sequence | MIGSLSFIFA NPAILAALIA LPVIWWLLRM TPPRPAAEIF PPLRILASVM KREETPSKSP
WWLTLLRMLM AAAVIFAIAD PVFNPRSNTL ATSGPLALLI DNGWATAPDW ERRVETASAL
IDDAESRDVA ISVVFTGERQ HDATPGSASA ARNRLAAARP EPLPADRASA IAALQTAFED
APPATLAFIT DGIASGDGKT MERLAAMGAS NLKVIEADGS EAVALTATSN ESGGMAVTAS
RLKTDDGRSL PIVAFDTRGR AIASGTIDFA PGAATARGTI EAPFELRNDF ARIGIEGAAT
AGAQHLLDDG FRRRRVALLS GEARDLSQPL LSPLYYINRA LAPYADLIEP RQNDLAVAIP
ELLEQRPSVL IMADIGRLPE ETYPLLAKWI ENGGTLIRFA GPRLAAAPAD DPLVPVTLRQ
GERALGGALS WSEPQPLADY PGNSPFAGMA RPTDILVKRQ VLAEPTADLA ERTWANLADG
TPLVTTAVRG TGRIVLFHVS AEATWSNLPI SGHFVEMLRR SVQLSRGGGI ASDGKAVKAQ
TLPPYRLLNA DGVLIAETGN VRPLEIVPGK PPVATADNPP GLYGSEDGFT ALNLLPRDAE
LKRIDMTAAG PHTSERLTGV ESWSLKPALM TIALLLLLAD ALIVLFMGGV FSRARIARAA
SAIIVVLAGA FVLAPPHAFA DDARPDDQRI LERLDTTHLA YVVTGEEDVD RLSESGLRGL
TDFLTYRTTL EPGAPVGLDI TKDELSLYPI IYWPISATAP MPSPQAVSRV DAYMRAGGTV
LFDTRDQFSS LGSSSNGTSQ NTERLQAILG NLDIPPLEPV PADHVLTKAF YLLTNFPGRY
TGSPLWIEAQ LDNGEETSNR PARPGDGVTP IMITGNDLAG AWAVDSNGVA LLPTVPPDEM
QREYAFRSGV NIMMYMLTGN YKADQVHVPA LLERLGQ
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