Gene Smed_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2275 
Symbol 
ID5323136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2350541 
End bp2351554 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID640791213 
ProductATPase 
Protein accessionYP_001327942 
Protein GI150397475 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.225446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA TGAGAGGCGC GACCGAACTT GCCGACGAAA AGGCGATCGT CGCAGCAGCC 
GAAGCGGCGC TCGGGGAGAT CGCGCTCGTC CGAGCCGAGA TCGGCAAGGT CATTTTCGGA
CAGGAAAGCG TCGTGGAACA GACGCTGCTT GCGGTGCTTT CCGGCGGGCA CGCGCTGCTT
GTCGGCGTAC CGGGGCTTGC CAAGACCAAG CTCGTTGCCA CCCTCGGCAC CGTTCTCGGG
CTCGACAACA GCCGGATTCA ATTCACGCCC GACCTGATGC CCTCGGATAT CCTTGGTTCC
GAGGTGATGG ACCAGGATGT CTCCGGCCAT CGCTCTTTCC GATTCATTCC AGGCCCGATC
TTCACGCAGC TCCTGATGGC CGACGAGATC AACCGCGCCT CGCCGCGCAC CCAGTCGGCC
CTTCTGCAGG CGATGCAGGA GTATCACATC ACGATCGCCG GCGACCGCAA GGACCTGCCG
CAGCCCTTTC ACGTGCTGGC AACACAGAAT CCGCTGGAGC AGGAAGGCAC CTATCCGCTG
CCGGAAGCCC AGCTCGACCG CTTCCTGATG CAGGTGGATG TCGGCTATCC CGAGCTTGCC
GCCGAACGGC AGATCCTGCT GGAGACGACG GGCCTTGCCG AAACCGAGGC GCGGCCCGTG
ATCGACGCAG GGCGCCTGCA GCAGGTCCAA GGCCTGATCC GGCAGATGCC CGTCGGTGAG
AAGGTGGTCG ATGCCATTCT CGCCCTGGTC CGTTCCGCGC GCCCCGGCAA CGGCAATGCT
GCTACCGACA AGAACGTCGC CTGGGGGCCG GGTCCGCGCG CCGGGCAGGC ACTGATGCTT
TGCGCCCGCG CCCGAGCTCT TTACGATGGC CGGCTTGCTC CGTCGATCGA CGATGTCCTT
GCGCTTGCCG AACCGGTTCT CCAGCACCGC ATGGCGCTGA CCTTCGCCGC CCGGGCGGAG
GGCATGTCGG TGCGCGATGT GATCGCCGAC CTCGTGAAAC AGGCCAAGGG CTGA
 
Protein sequence
MSVMRGATEL ADEKAIVAAA EAALGEIALV RAEIGKVIFG QESVVEQTLL AVLSGGHALL 
VGVPGLAKTK LVATLGTVLG LDNSRIQFTP DLMPSDILGS EVMDQDVSGH RSFRFIPGPI
FTQLLMADEI NRASPRTQSA LLQAMQEYHI TIAGDRKDLP QPFHVLATQN PLEQEGTYPL
PEAQLDRFLM QVDVGYPELA AERQILLETT GLAETEARPV IDAGRLQQVQ GLIRQMPVGE
KVVDAILALV RSARPGNGNA ATDKNVAWGP GPRAGQALML CARARALYDG RLAPSIDDVL
ALAEPVLQHR MALTFAARAE GMSVRDVIAD LVKQAKG