Gene Smed_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2254 
Symbol 
ID5323115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2331084 
End bp2331878 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID640791192 
Producthypothetical protein 
Protein accessionYP_001327921 
Protein GI150397454 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.57305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATG ATGCCTCGCT ATCCCCTGTG CAGAGCCCGC TCTTCGGCGC AAAGGCAGGC 
CCGTCAATCG CACACGGCTA TTTCACCCGC GAGGGAGGCG TGTCCGAGGG CATCTATCGC
GGCTTGAATG TCGGTCTCGG CTCTCACGAC GACCGGGAAC GAGTCGGCAC AAATCGCGCT
CGGGTCGCCC GCTGGTTCAA TGCGGAGCCA CGGCGGCTTG CGACTGTGCA CCAGATCCAT
TCACCGGATG CGATCATCGT CGACGCCAGC TATGACGGCA CGCGGCCGGA TGCCGATGCA
CTGGTGACGG CGACCCCCGG CATCGTTCTC GGCGTTCTTT CTGCCGACTG CGGACCAGTT
CTGTTTGCCG ATCCGGAAGC AGGCGTGATC GGTGCCGCCC ATGCCGGATG GAAGGGTGCG
CTGGGCGGCG TGCTCGAAAG CACCATCGAA GCGATGATCT CGCTTGGTGC CCGTCGCGAG
CGTGTCATTG CCTGCCTGGG CCCGTCGATC AGCCGGAGGC ATTACGAGGT TGGCCCCGAA
TTCGTGGCCC GTTTCGTCGC CGCAGATGCA AGCTACAAGT CCTTTTTCAC CCCGTCCGGC
CGCGACGGCC ATGCCATGTT CGATCTGCCC GGACTGACGG TCCGGCGTCT GGCGGAAGCC
GGCGTGACCG CGGAAAATCT CGGCATCTGC ACCTATGCCG ACGAGGACCG CTTTTTCTCC
TACCGCCGTA CCACGCACAG GCAGGAGCCT GACTATGGAC GGCAGATATC CGCGATTTCC
ATACGGGAGG CTTGA
 
Protein sequence
MQDDASLSPV QSPLFGAKAG PSIAHGYFTR EGGVSEGIYR GLNVGLGSHD DRERVGTNRA 
RVARWFNAEP RRLATVHQIH SPDAIIVDAS YDGTRPDADA LVTATPGIVL GVLSADCGPV
LFADPEAGVI GAAHAGWKGA LGGVLESTIE AMISLGARRE RVIACLGPSI SRRHYEVGPE
FVARFVAADA SYKSFFTPSG RDGHAMFDLP GLTVRRLAEA GVTAENLGIC TYADEDRFFS
YRRTTHRQEP DYGRQISAIS IREA