Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2242 |
Symbol | |
ID | 5323103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2320673 |
End bp | 2321305 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791180 |
Product | hypothetical protein |
Protein accession | YP_001327909 |
Protein GI | 150397442 |
COG category | [S] Function unknown |
COG ID | [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.700744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA CCCTCTCTCC GACCCCTTCT AAAGCGGCCC GATTAAGGGC TGCCTTGACG GCGAGCGCGC TGCTTGCCGT CATCCCCTCG GCCTACGCCG AAATGAGTGC GACGACGCTG ACGGACCTCA ACGTGCGCGC CGGCCCCGGT CCGCAATACC CGGCGGTCGG CGTCGCGACA CGCGGCAGCG CCGCTGTGCT CGACGGTTGC ATGGAAGGGA GCAACTGGTG CCGCATCGAC GTCAACGGCT TGCGCGGCTG GGCCTATGCC CGCTATCTGG CAACGGATAT GGGCGGTACC ACCGCCGTGA TACAGGAGCG CCGCACCGAA TTGTCGGTGC CCACCGTGAC CTATGAGGGC GAGATGGTTG CGGCGACGTC CGAACCGCTC GAACTGGTCG GCCCGGTCGA AGAAGTCGAA GCCGTAACGC CGCCTCCGAC GGTGCGCACC TATATCACCG AGAATCCGGT CGACACGGTT TACGTCGATG GAGAAGCCGT GGTGGGTGCC ACGCTGCCGA ACACAGTCTC CGTTCAGCCC ATTCCCGACT ATGAGTACCA GTACGTGACC ATCAACGGCC AGCCCGTACT CGTCGACCCG GGTACAAGGC GGGTGGTCTA CGTCTATCGC TGA
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Protein sequence | MMKTLSPTPS KAARLRAALT ASALLAVIPS AYAEMSATTL TDLNVRAGPG PQYPAVGVAT RGSAAVLDGC MEGSNWCRID VNGLRGWAYA RYLATDMGGT TAVIQERRTE LSVPTVTYEG EMVAATSEPL ELVGPVEEVE AVTPPPTVRT YITENPVDTV YVDGEAVVGA TLPNTVSVQP IPDYEYQYVT INGQPVLVDP GTRRVVYVYR
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