Gene Smed_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2242 
Symbol 
ID5323103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2320673 
End bp2321305 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID640791180 
Producthypothetical protein 
Protein accessionYP_001327909 
Protein GI150397442 
COG category[S] Function unknown 
COG ID[COG4991] Uncharacterized protein with a bacterial SH3 domain homologue 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.700744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA CCCTCTCTCC GACCCCTTCT AAAGCGGCCC GATTAAGGGC TGCCTTGACG 
GCGAGCGCGC TGCTTGCCGT CATCCCCTCG GCCTACGCCG AAATGAGTGC GACGACGCTG
ACGGACCTCA ACGTGCGCGC CGGCCCCGGT CCGCAATACC CGGCGGTCGG CGTCGCGACA
CGCGGCAGCG CCGCTGTGCT CGACGGTTGC ATGGAAGGGA GCAACTGGTG CCGCATCGAC
GTCAACGGCT TGCGCGGCTG GGCCTATGCC CGCTATCTGG CAACGGATAT GGGCGGTACC
ACCGCCGTGA TACAGGAGCG CCGCACCGAA TTGTCGGTGC CCACCGTGAC CTATGAGGGC
GAGATGGTTG CGGCGACGTC CGAACCGCTC GAACTGGTCG GCCCGGTCGA AGAAGTCGAA
GCCGTAACGC CGCCTCCGAC GGTGCGCACC TATATCACCG AGAATCCGGT CGACACGGTT
TACGTCGATG GAGAAGCCGT GGTGGGTGCC ACGCTGCCGA ACACAGTCTC CGTTCAGCCC
ATTCCCGACT ATGAGTACCA GTACGTGACC ATCAACGGCC AGCCCGTACT CGTCGACCCG
GGTACAAGGC GGGTGGTCTA CGTCTATCGC TGA
 
Protein sequence
MMKTLSPTPS KAARLRAALT ASALLAVIPS AYAEMSATTL TDLNVRAGPG PQYPAVGVAT 
RGSAAVLDGC MEGSNWCRID VNGLRGWAYA RYLATDMGGT TAVIQERRTE LSVPTVTYEG
EMVAATSEPL ELVGPVEEVE AVTPPPTVRT YITENPVDTV YVDGEAVVGA TLPNTVSVQP
IPDYEYQYVT INGQPVLVDP GTRRVVYVYR