Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2221 |
Symbol | |
ID | 5323082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2298358 |
End bp | 2298927 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791159 |
Product | putative transmembrane protein |
Protein accession | YP_001327888 |
Protein GI | 150397421 |
COG category | [S] Function unknown |
COG ID | [COG4764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.860046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.348957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTGCG TTTTTGTCGT CGTCCTCCTG TTGTTGGCCG GCTGCGGAAC GGTGCCGAGA GAGACCCGGA ACGCCTGTGC GGTTTTCGAG CAGCGAGACA ATCTTTTCAA CAATTGGCGC CGGGCTGCCT ATGCGGCAGA GCGTGAATAT GGCGTGCCCG TTCCGGTGCT GATGGCGACG GTCTATACGG AGTCCGGCTT CCGCCATAAT GCCAAGCCGC CGCGGACGAA ACTCCTCGGC TTCATTCCGT GGACAAGGAT TTCCTCGGCC TATGGATATT CGCAGGCGCT TGACGGCACC TGGGCGCGAT ATCAGGCAGA AACGGGCCGA TGGACGGCAC GCCGGTCGGA TTTCGGGGAC GCGATCCGCT TTATCGCCTG GTACCACAAT CAGAGCCACA AGCGGAACGG CATTGCCCTG AACGACACGT ACAGACTCTA TATCGCCTAT TACCACGGCC ACAGCGGTTA TGCCCGCGGC AACTGGAGCG CCACGGCGAA GGCGGGCGCC AAACGGGCGT CCGGCATGGC CGCTGTCTAC GCGCGCCAAT TGCGCGGCTG CAATTCGTGA
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Protein sequence | MRCVFVVVLL LLAGCGTVPR ETRNACAVFE QRDNLFNNWR RAAYAAEREY GVPVPVLMAT VYTESGFRHN AKPPRTKLLG FIPWTRISSA YGYSQALDGT WARYQAETGR WTARRSDFGD AIRFIAWYHN QSHKRNGIAL NDTYRLYIAY YHGHSGYARG NWSATAKAGA KRASGMAAVY ARQLRGCNS
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