Gene Smed_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2218 
Symbol 
ID5323079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2296935 
End bp2297339 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID640791156 
Producthypothetical protein 
Protein accessionYP_001327885 
Protein GI150397418 
COG category 
COG ID 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.190244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.341322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CCCAGACGAT AGCCAGCCGT TTCATGGAAG CCCTGAACGA TCGCGACTTC 
GACGCGCTTT CCCGCCTCGT CGACGAGGAC GTTGCGTTCG ACTCGCTCAG CGGAGAGCGA
ACCCTCGGTG CCGGCTCGCT CAGGAGCTGG ATGATGAACT ATCTGCGCCA TTTCGACGAG
AGCTTGAGTG ACATCGTGCT GATGCGAGAC GCCGCCGGCC AGCGCGTGGC TGCGGACACG
ACCGCGCGCG GCACTTACCG CGAGACTTTG GCCGGCTTTC CCGACGCCTC CGGTCAGGCC
TATTCCATCG CGAGCGTCTT TGTCTTCGAG ATCGAGGACG GCCTGATCAC GCGGCTCAGC
CAATATCGTA ACATCCGGCT CTTCGAGCGG GAACTCGCGG GCTGA
 
Protein sequence
MTDAQTIASR FMEALNDRDF DALSRLVDED VAFDSLSGER TLGAGSLRSW MMNYLRHFDE 
SLSDIVLMRD AAGQRVAADT TARGTYRETL AGFPDASGQA YSIASVFVFE IEDGLITRLS
QYRNIRLFER ELAG