Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2209 |
Symbol | |
ID | 5323069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2288962 |
End bp | 2289756 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791146 |
Product | hypothetical protein |
Protein accession | YP_001327876 |
Protein GI | 150397409 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.532125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.140639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGGCA CGATGGCATT GATCCTGGCA CTGAGCGGAG CTCCGATACA GTCGGCAGCC ATTTCCGCTG ACGTCGACGT AGAACTCCTG CTGGCCGTCG ACATGTCCGG CTCGATGGAC ATGGAGGAGG CGCGCGTGCA GCGCTCCGGA TATCTGCAGG CGCTGCGGCA TCCGGATTTC ATCAATGCGG TCCAGGGAGG CCTCCTCGGG CGGATCGCCA TAGGCTATTT CGAATGGGCA GGGCTCGTAA ACGAGGCCTC AGTCGTGAGC TGGCAAGTGA TCGAAAGTTC TGCCGACGCC GAAGCCTTCG CCGGCAAGCT GGAGGCTCGG CCAATCGGAA CACGGCGCGG CACCTCGATC TCGAACGCGA TCCTGTTTGG TTCGGACCTC ATCGATTCGA ACGCATATTC GGGTACGCGA AGGGTCATCG ACATCTCCGG CGACGGGCCG AACAATACCG GGCCGCCGGT TACACCCGCA CGCAACGACG CCCTATCGCG GGGCATTATA ATCAACGGTC TTGCAATCCT CATCCGCCCT TCGGTCTCGA CCGGGCCGCT CGACCGGTAT TACGCCGAAT GCGTCATTGG CGGCCCCGGC TCCTTCGTGT TGCCCGTGCA TGAACCCGAG GATTTCGCGG TCGCAATCCG TCAGAAGCTG ATCCTCGAGG TAAGCGGGCG CGAGCCCGAT CCGGCGCTCC GCCTGGCGGC CGGCGAAAAT GCGGCGGACT GCATGATAGG CGAGAAGCTC CGGCCGGGAT TTCTCGACAG GGTCTATCCG GAACTGGATC GCTGA
|
Protein sequence | MLGTMALILA LSGAPIQSAA ISADVDVELL LAVDMSGSMD MEEARVQRSG YLQALRHPDF INAVQGGLLG RIAIGYFEWA GLVNEASVVS WQVIESSADA EAFAGKLEAR PIGTRRGTSI SNAILFGSDL IDSNAYSGTR RVIDISGDGP NNTGPPVTPA RNDALSRGII INGLAILIRP SVSTGPLDRY YAECVIGGPG SFVLPVHEPE DFAVAIRQKL ILEVSGREPD PALRLAAGEN AADCMIGEKL RPGFLDRVYP ELDR
|
| |