Gene Smed_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2209 
Symbol 
ID5323069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2288962 
End bp2289756 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID640791146 
Producthypothetical protein 
Protein accessionYP_001327876 
Protein GI150397409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.532125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.140639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGCA CGATGGCATT GATCCTGGCA CTGAGCGGAG CTCCGATACA GTCGGCAGCC 
ATTTCCGCTG ACGTCGACGT AGAACTCCTG CTGGCCGTCG ACATGTCCGG CTCGATGGAC
ATGGAGGAGG CGCGCGTGCA GCGCTCCGGA TATCTGCAGG CGCTGCGGCA TCCGGATTTC
ATCAATGCGG TCCAGGGAGG CCTCCTCGGG CGGATCGCCA TAGGCTATTT CGAATGGGCA
GGGCTCGTAA ACGAGGCCTC AGTCGTGAGC TGGCAAGTGA TCGAAAGTTC TGCCGACGCC
GAAGCCTTCG CCGGCAAGCT GGAGGCTCGG CCAATCGGAA CACGGCGCGG CACCTCGATC
TCGAACGCGA TCCTGTTTGG TTCGGACCTC ATCGATTCGA ACGCATATTC GGGTACGCGA
AGGGTCATCG ACATCTCCGG CGACGGGCCG AACAATACCG GGCCGCCGGT TACACCCGCA
CGCAACGACG CCCTATCGCG GGGCATTATA ATCAACGGTC TTGCAATCCT CATCCGCCCT
TCGGTCTCGA CCGGGCCGCT CGACCGGTAT TACGCCGAAT GCGTCATTGG CGGCCCCGGC
TCCTTCGTGT TGCCCGTGCA TGAACCCGAG GATTTCGCGG TCGCAATCCG TCAGAAGCTG
ATCCTCGAGG TAAGCGGGCG CGAGCCCGAT CCGGCGCTCC GCCTGGCGGC CGGCGAAAAT
GCGGCGGACT GCATGATAGG CGAGAAGCTC CGGCCGGGAT TTCTCGACAG GGTCTATCCG
GAACTGGATC GCTGA
 
Protein sequence
MLGTMALILA LSGAPIQSAA ISADVDVELL LAVDMSGSMD MEEARVQRSG YLQALRHPDF 
INAVQGGLLG RIAIGYFEWA GLVNEASVVS WQVIESSADA EAFAGKLEAR PIGTRRGTSI
SNAILFGSDL IDSNAYSGTR RVIDISGDGP NNTGPPVTPA RNDALSRGII INGLAILIRP
SVSTGPLDRY YAECVIGGPG SFVLPVHEPE DFAVAIRQKL ILEVSGREPD PALRLAAGEN
AADCMIGEKL RPGFLDRVYP ELDR