| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2197 |
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| Symbol | |
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| ID | 5323057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2275109 |
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| End bp | 2277556 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791135 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001327865 |
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| Protein GI | 150397398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.031847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC CGATCCCTGA AAAGGCGCGC GTGGTCATCA TCGGCGGTGG CGTTTCCGGT
TGTTCGGTCG CCTATCACCT GTCAAAGCTC GGCTGGACCG ACGTCGTGCT GCTCGAGCGC
AAGCAGCTCA CCTGCGGCAC CACCTGGCAT GCGGCCGGGC TGATCGGCCA GCTGCGCGCC
TCGCAGAACA TGACACGCCT CGCAAAATAT TCGGCCGACC TTTACGTGAA CCTCGAGGCG
GAGACCGGCA TTGCTACCGG CATGCGCCAG AACGGCTCGA TCACCGTGGC GCTGACGGAA
GAGCGCAAGG AGGAGATCTA CCGCCAGGCT TCGCTAGCGC GTGCCTTCGA TGTGGATGTG
CGCGAGATCT GTGCGAGCGA AGTGAAGGCG CTCTATCCGC ACCTCAACGT CTCCGATGTT
AAGGCGGCGG TGCACCTGCC GCTGGACGGT CAATGCGATC CGGCCAATAT CGCCATGGCG
CTTGCCAAGG GTGCGCGGCA GAACGGCGCG ACGATCATCG AGGGCGTGAA AGTCACCTCG
GTGTTGAAGA AGGATGGCCG TGTTGCCGGT GTCACCTGCA AGCAGAACGG CGAGAATTAC
ACCATCGAGA CCGAGAACGT CGTCAACTGC GCCGGCATGT GGGGCAGGGA GCTTGCCCGG
CAATCCGGTG TGACGGTGCC GCTGCACGCC TGCGAGCATT TCTACATCGT GACCGAGGCA
GTGCCGGGTC TGGGCCGCCT GCCGGTGCTG CGCGTACCCG ACGAGTGCAC CTACTACAAG
GAAGACGCAG GCAAGATGCT CGTGGGCGCC TTTGAGCTGA AAGCCAAGCC CTGGGGCATG
GAAGGCATTC GCGAGGACTT CTGCTTCGAC CAGCTGCCGG AGGACTTCGA CCATTTCGCG
CCGATCCTCG AAATGGCGGT CAACCGCATG CCGATGCTGG AGACGGCCGG CATTCATACC
TTCTTCAACG GGCCGGAAAG CTTCACCCCC GACGACCGCT ACTATCTTGG CGAGGCGCCC
GAGGTTAAGG GATATTGGGT TGCCGCCGGA TATAATTCGA TCGGCATCGT CTCTTCCGGG
GGTGCCGGAA TGGCGCTGGC GCAGTGGATG AACGACGGCG AGCCGCCCTT CGACCTCTGG
GAGGTCGACA TCCGCCGCGC CCAGCCTTTT CAGAAAAACC GCTCCTACCT GAAGGAGCGC
GTGGGCGAGA CGCTTGGACT GCTCTATGCA GATCATTTCC CCTATCGCCA GATGGCAACC
GCGCGCGGTG TTCGCCGCTC GCCCATCCAT GAGCACCTGA AGGCGCGCGG TGCCGTGTTC
GGCGAAGTGG CGGGATGGGA GCGGGCGAAC TGGTTCGCGG AACAGGGTCA GGAGCGCGAA
TATCGTTACT CCTGGAAGCG GCAGAACTGG TTTGAAAATC AGCGGCAGGA GCACCTTGCG
GTCCGCAGCA AGGTCGGCCT CTTCGACATG ACGTCCTTCG GGAAGATTCG TGTCGAAGGT
CGCGATGCGC TCGCCTTCCT GCAACGGCTT TGCGCCAATG AGATGGATGT CGAGCCCGGC
CGTGTCGTCT ACACGCAGAT GCTGAACGCT CGGGGCGGCA TCGAGAGCGA CCTTACCGTC
ACCCGGTTCT CGGAATCCGC ATTTTTCCTC GTCGTGCCCG GTGCGACCCT GCAGCGGGAC
CTTTCCTGGT TGCGGAGGCA CTTGCGTGAC GAATTCGTGG TGGTCACTGA CGTCACCGCC
GCCGAAAGCG TACTCTGCGT CATGGGACCG AAGGCTCGGG ACCTTATGCA GAAGGTGAGC
CCGAACGATT TCTCCAATGA AGCGCATCCT TTCGGCACCG CGCGCGAGAT CGAAGTCGGC
ATGGGTTTAG CCCGCGCTCA CCGTGTCACG TATGTCGGCG AACTAGGCTG GGAGCTTTAT
GTATCGACCG ACCAGGCGGC GCATGTGTTC GAGACGCTGG AGGCGGCGGG CGCCGACGCC
GGCCTCCGGC TCTGCGGCCT TCACACGCTG GACAGTTGCC GGATCGAGAA AGCGTTCCGG
CATTTCGGCC ATGACATAAC CGATGAGGAT CACGTGCTCG AAGCCGGACT CGGCTTTGCA
GTGAAGTCCG CCAAGGGCGA ATTCATCGGC CGCGAAGCAG TGCTCGCGAA GCGCGACAAG
GGCCTTTCGC GCAGGCTGTT GCAGTTCCGG CTTTCCGATC CGGAGCCGTT GCTCTTCCAC
AACGAGGCGA TCGTGCGCGA TGGCGAGATC GTCGGAACGA TCACGTCCGG CAATTACGGA
CATCACCTCG GTGGCGCGAT CGGGCTCGGC TACGTGCCTT GCCAGGGGGA GGGCGAGGCG
GATGTGCTTG CATCGGGCTA CGAGATCGAA ATCGCCGGAA CACGGGTCAA GGCCGTGGCT
TCATCGAAGC CGATGTACGA TCCGAAGGCG GAGCGGGGGA AGGCCTGA
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| Protein sequence | MTKPIPEKAR VVIIGGGVSG CSVAYHLSKL GWTDVVLLER KQLTCGTTWH AAGLIGQLRA
SQNMTRLAKY SADLYVNLEA ETGIATGMRQ NGSITVALTE ERKEEIYRQA SLARAFDVDV
REICASEVKA LYPHLNVSDV KAAVHLPLDG QCDPANIAMA LAKGARQNGA TIIEGVKVTS
VLKKDGRVAG VTCKQNGENY TIETENVVNC AGMWGRELAR QSGVTVPLHA CEHFYIVTEA
VPGLGRLPVL RVPDECTYYK EDAGKMLVGA FELKAKPWGM EGIREDFCFD QLPEDFDHFA
PILEMAVNRM PMLETAGIHT FFNGPESFTP DDRYYLGEAP EVKGYWVAAG YNSIGIVSSG
GAGMALAQWM NDGEPPFDLW EVDIRRAQPF QKNRSYLKER VGETLGLLYA DHFPYRQMAT
ARGVRRSPIH EHLKARGAVF GEVAGWERAN WFAEQGQERE YRYSWKRQNW FENQRQEHLA
VRSKVGLFDM TSFGKIRVEG RDALAFLQRL CANEMDVEPG RVVYTQMLNA RGGIESDLTV
TRFSESAFFL VVPGATLQRD LSWLRRHLRD EFVVVTDVTA AESVLCVMGP KARDLMQKVS
PNDFSNEAHP FGTAREIEVG MGLARAHRVT YVGELGWELY VSTDQAAHVF ETLEAAGADA
GLRLCGLHTL DSCRIEKAFR HFGHDITDED HVLEAGLGFA VKSAKGEFIG REAVLAKRDK
GLSRRLLQFR LSDPEPLLFH NEAIVRDGEI VGTITSGNYG HHLGGAIGLG YVPCQGEGEA
DVLASGYEIE IAGTRVKAVA SSKPMYDPKA ERGKA
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