Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2158 |
Symbol | |
ID | 5323018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2227149 |
End bp | 2228186 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791096 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001327826 |
Protein GI | 150397359 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.241833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TAGCCATTAT CGGCGACCGG TTCATGCTGC CGGATGTTTT TCGCGACAAG ATCGTCGAGG CATGCGGCGA CGGGCACGAG ATAAGCATGC TCGAACTGCC CTGGCCGGAC GTGCCGATGG AGCACGGCTA CGCAGTCGAA GGCATGGACG GGCTCAAGGA ATATCTAGGC AAGCCCGGCG AAATCGTCGA TTTCATCGGC GATGCCGAAA TTCTGGTGAC GCAGCTTGCT CCTTTATCGC GAACGATGCT TCAGGACCTG CCGGGTTTGA AACTCGTCGC CGTGTCACGC GGCGGCCCGG TCAATATCGA TATCAAGGCG GCCCGCGATG CAGGGGTCCG CGTCGTCAAT GCGCCCGGCC GGAATGCGAG CGCCGTCGCC GAGTTCACGA TCGGCGCCAT CCTCGCGGAG ACGCGCCTCA TTCGCGTGGG GCACGAGGCG CTGAGGCGGA GCGAATGGCG CGGCGATCTC TATCGCGCCG ACCGCACCGG GCGGGAGCTG TCCGAAATGA CCGTGGGCGT CATCGGCTAC GGCAATATCG GCACCAGGGT GGTTCGGCTG CTTCGCGCCT TCGGCACCAA AGTGCTCGTC CATGACCCCT ATGTTCAGCT CAGCGCCGAG GACCGGAATG CCGGCGTCGA GCATGTTTCC CTCGATGATC TGCTCGCCCG TGCGGACCTC GTGACGCTGC ATCCGCGCGT GAGCGAAGAG ACGAGGAATA TGATGAATGC GGAGACCTTC GCGAAGATGA AGCCGGGTGC GATCTTCGTG AACACGGCGC GCGGCCCGCT CTGCGATTAT GACGCGCTCT ACGAAAACCT CGTCAGCGGT CATCTTGCAA GCGCCATGCT GGAGACTTTT GCCGTCGAGC CCGTGCCGGA AGGCTGGCCG CTCCTGAAAC TCCCCAACGT GACGCTGACG CCGCACATAG CGGGAGCGTC GGTGCGTACC GTGACCTATG CGGCTGAAAT GGCCGCAGAG GAAGTGCGCC GCTATATCGC CGGTCTGCCG CCGGTCAATC CGTGCTGA
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Protein sequence | MKKIAIIGDR FMLPDVFRDK IVEACGDGHE ISMLELPWPD VPMEHGYAVE GMDGLKEYLG KPGEIVDFIG DAEILVTQLA PLSRTMLQDL PGLKLVAVSR GGPVNIDIKA ARDAGVRVVN APGRNASAVA EFTIGAILAE TRLIRVGHEA LRRSEWRGDL YRADRTGREL SEMTVGVIGY GNIGTRVVRL LRAFGTKVLV HDPYVQLSAE DRNAGVEHVS LDDLLARADL VTLHPRVSEE TRNMMNAETF AKMKPGAIFV NTARGPLCDY DALYENLVSG HLASAMLETF AVEPVPEGWP LLKLPNVTLT PHIAGASVRT VTYAAEMAAE EVRRYIAGLP PVNPC
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