| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2151 |
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| Symbol | |
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| ID | 5323011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2219889 |
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| End bp | 2220674 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791089 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001327819 |
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| Protein GI | 150397352 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.760268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCGG ACGACAGGCG GCAGGCGATC ATGGATGTCC TCATGGAAGC GGGAACGGCT
TCCGTCGAGG AGCTCAGCTT CCGCTTTGGC GTCAGCAAGA TGACCGTGCA TCGGGATCTC
GACGATCTCG AGCAGGCAGG GCTCCTGCGA AAGGTTCATG GCGGTGCTTC CATCCAGTCG
AGCCCGCAGT TCGAAAGCGA TTTCCGCTAT CGCGAGAAGA TCGCGACGAG TGAAAAGCGC
CGCCTTGGCG AGTACGCCGC GACCCTGGTC GAGCCGGGCC AGAGCGTCAT AATCGACGAC
AGCTCGACGG CTGGCGCGAT TGCCGGTTTT CTCAAGGATA TTCGCCCGCT CACGGTCATT
ACCAATAACC TTGGCGTCAT CACCGATCTG TCCGGTGTCC CGGGTATGAA CCTGATCGCG
CTGGGCGGCC ATTACAGCAA GAGGTTCAAC GGGTTTTTCG GCGTCGTCAC CGAGGAGGCG
CTGCGATCTC TGCGCGCGGA CGTGGCGTTC CTGTCAAGTT CGGCGGTCGA GGGAACGGCC
GCCTTCCACC AGGACCAGGA AGTGGTTCAG ATCAAGCGTC AGATGGTGAA ATCGGCCAAC
CGCAAATATC TCCTGGTGGA CCACGGCAAG TTCGGCCGTT CGGCCTTGCA TTTCCTGATG
GGGCTCGAGG CCTTCGACGC GGTTCTGACC GGGAGCGAAG TGTCCGACGG GCACGCAAGG
GAACTGGGAG ACGCCGGCGT CGGGCTCCTC AGGATCGACA ACCAGAAAAT AATGGAGAAG
GCATGA
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| Protein sequence | MKPDDRRQAI MDVLMEAGTA SVEELSFRFG VSKMTVHRDL DDLEQAGLLR KVHGGASIQS
SPQFESDFRY REKIATSEKR RLGEYAATLV EPGQSVIIDD SSTAGAIAGF LKDIRPLTVI
TNNLGVITDL SGVPGMNLIA LGGHYSKRFN GFFGVVTEEA LRSLRADVAF LSSSAVEGTA
AFHQDQEVVQ IKRQMVKSAN RKYLLVDHGK FGRSALHFLM GLEAFDAVLT GSEVSDGHAR
ELGDAGVGLL RIDNQKIMEK A
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