Gene Smed_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2141 
Symbol 
ID5323001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2209241 
End bp2210374 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content61% 
IMG OID640791079 
Productpeptidase M24 
Protein accessionYP_001327809 
Protein GI150397342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.776272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATT ATCCGGCGAT CACCAGTACG GAGCGCCAAA CGCGCATATC CCGTTTGCGG 
GCCACTCTTT CGGAGCGGAA CGTCGGCGGG CTCCTGCTGG GTTCTACGGA AAGTCTCCGC
TACTATACAG GGCTGGAGTG GCACGCCAGC GAACGGTTCC TCGGCGCTCT CATCACGGGT
TCCGACCTGA TCTATATCGC CCCCGCGTTC GAGCTGAGCC GGGTCGAGAC CCTGTCACGC
GAACCAGGTG AAATCCGCGC ATGGCAGGAG GAGGAAAGCA GTGCCGCCCT CGTCGCATCG
CTTCTGCCTC CTGAGGCGAC ACTCGCTGTC GATGATTCAC TGCCGTTGTT TGCGTATAAC
GCTCTGGTGG GGGAAATTGC GGCCCGCAGG CTGATTGACG GAGGTCCGCT TATCCGTGCC
CAACGAAGGT TGAAATCTGC GGCCGAGATC GAGATCATCC AGTTCGCGAT GAACCTGACC
CTGGAGGTGC ATCGGCGCGC GCATAAGTTC ATCAAACCTG GGATTTCAGC GTCGGAGGTC
AGGCGCTACA TCGACGATCA GCATCGGCTG CTCGGCGCTC CAGGCGGCTC CAGTTTCTGT
ATCGTCTCCT TCGGAGATGC GACTGCGCTG CCCCATGGGG CGGAGGGGGA ACAGGTCTAC
AAGCCCGGCG ACGTGGTGCT GGTCGACACC GGCTGCCGCA TTGGCGGCTA CCACTCGGAC
CTGACCCGGA CCTATATGAT CGATGACCCG ACGCCCGAAT TCGCTCGTAT TTGGGCTATC
GAGAGGGAAG CTCAGCTGGC CGTGTTCGAA GCTGCTCACA TCGGAGCCAC ATGCGGCAGC
CTTGATTCGG CTGCCCGAGA CGTTCTCGTT CGCAACGGGC TCGGGCCGGA CTACAAACTC
CCGGGTCTTC CTCACCGCGC CGGGCACGGG ATCGGCCTCG AAATTCACGA GGAGCCATAT
ATTGTCCGCA GTAATCACTT CGCCCTCTCC GAAGGTATGT GCTTCTCGGT CGAGCCTATG
ATCGTCGTTC CGGAAGCGTT CGGCGTTCGC CTCGAGGACC ACATCTACAT GAGCAAAGAC
GGCCCCGTCT GGTTTACGGC GCCCGCCGAA GGCCCCACCG AGCCGTTCGC TTGA
 
Protein sequence
MANYPAITST ERQTRISRLR ATLSERNVGG LLLGSTESLR YYTGLEWHAS ERFLGALITG 
SDLIYIAPAF ELSRVETLSR EPGEIRAWQE EESSAALVAS LLPPEATLAV DDSLPLFAYN
ALVGEIAARR LIDGGPLIRA QRRLKSAAEI EIIQFAMNLT LEVHRRAHKF IKPGISASEV
RRYIDDQHRL LGAPGGSSFC IVSFGDATAL PHGAEGEQVY KPGDVVLVDT GCRIGGYHSD
LTRTYMIDDP TPEFARIWAI EREAQLAVFE AAHIGATCGS LDSAARDVLV RNGLGPDYKL
PGLPHRAGHG IGLEIHEEPY IVRSNHFALS EGMCFSVEPM IVVPEAFGVR LEDHIYMSKD
GPVWFTAPAE GPTEPFA