Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2134 |
Symbol | |
ID | 5322994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2200942 |
End bp | 2202036 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791072 |
Product | extracellular solute-binding protein |
Protein accession | YP_001327802 |
Protein GI | 150397335 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.575498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.605089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC GCCTGCTCTC GCTTTCGACC GCCATGCTGC TCGCTACGAC GGCAGTTGCC GTTGCCGAGC CGAGCGAGGA GCTCATCGCA GCCGCCAAGA AGGAAGGCAC GCTGACGACA ATCGCGCTCC CGCACAATTG GTGCGGGTAT GGAGACGTGA TCGCCGGCTT CAAGGCCAAA TACGGTATCG AAGTCAACGA ACTGAACCCG GATGCGGGCT CCGGCGACGA GATCGAGGCG ATCAAGGCCA ACAAGGGCAA CACCGGCCCG CAAGCACCCG ATGTCATCGA CGTCGGCCTG TCCTTCGGCC CCTCGGCCAA GGCCGAAGGC CTGATCCAGC CCTACAAGGT TTCGACCTGG GATACGATTC CGGACACGGC GAAGGACCCG GAGGGCTATT GGTACGGCGA TTACTACGGC GTTCTCTCCT TCGTGGTGAA CACCGATATC GTCAAGGATG TGCCGAAGGA CTGGGCGGAC CTCAAAAAGT CCGACTATGC GAATTCGGTT GCGCTCGCCG GCGATCCGCG GGCATCCAAC CAGGCGGTAC AGGCGGTCTA CGCAGCCGGC CTCGCGGCCG GTGAGACGGA TGCGGCCAAA GCGGGCGAAG CCGGTCTTGC CTTCTTCGCC GAGGTCAACA AGGCCGGCAA CTTCGTCCCT GTGATCGGCA AGTCCGCCTC CCTTGCGCAA GGATCGACCC CGATCATCAT CGCCTGGGAC TATAACGGCC TCTCCTGGCG CGACAGCCTG AACGGCAACC CGCCGGTCGA GGTCGTCGTT CCAGCCTCCG GTGTCGTCGC CGGCGTCTAC GTCCAGGCGA TCTCGGCCTT CGCGCCGCAT CCGAACGCGG CCAAGCTCTG GATGGAATAT CTGTATTCGG ACGAAGGTCA GCTCGGCTGG CTGAAGGGCT ATTGCCACCC GATCCGCTTC AACGACCTCG TCAAGAACGG CAAGGTTCCG CAGGAAATGC TCGACAAGCT GCCGCCGGCG GCATCCTACG AGAAGGCCGT CTTCCCGACG CTCGAAGAGC AGGAAGCCGG CAAGGCAGCG ATCACCACGA AGTGGGATAG CGTCGTCGGC GCGAGCGTAC AGTAG
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Protein sequence | MTQRLLSLST AMLLATTAVA VAEPSEELIA AAKKEGTLTT IALPHNWCGY GDVIAGFKAK YGIEVNELNP DAGSGDEIEA IKANKGNTGP QAPDVIDVGL SFGPSAKAEG LIQPYKVSTW DTIPDTAKDP EGYWYGDYYG VLSFVVNTDI VKDVPKDWAD LKKSDYANSV ALAGDPRASN QAVQAVYAAG LAAGETDAAK AGEAGLAFFA EVNKAGNFVP VIGKSASLAQ GSTPIIIAWD YNGLSWRDSL NGNPPVEVVV PASGVVAGVY VQAISAFAPH PNAAKLWMEY LYSDEGQLGW LKGYCHPIRF NDLVKNGKVP QEMLDKLPPA ASYEKAVFPT LEEQEAGKAA ITTKWDSVVG ASVQ
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