| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2113 |
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| Symbol | |
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| ID | 5322973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2174863 |
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| End bp | 2176080 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791051 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001327781 |
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| Protein GI | 150397314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.29233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCC TAGCGCGCAA AGCCCTTCTC TCCCTCGGAT TGCTCGCGGT TGCCGGCGCG
CCGGCCCTGG CGCAAGCTCC GGCTCAGCCA CGAAATCCGG CCGTTGCGTG CGGCGGCGAT
CTCGCCACGT TCCTCGCGGG AATCAAGGCG GAAGCGATTG CCAAGGGCAT CCCCGCAGAC
GCGGCAGAGC GGGCGCTTGC GGGCGCCGCT ATCGACCAGA AAGTGCTGAG CCGCGACCGG
GCGCAAGGGG TATTCAAGCA GACCTTCACG GAGTTCTCGA AGCGAACCGT CAGCAAGTCG
CGCCTCGACA TCGGTGCACG GAAGATGCGG GAATATGCCG AAGTCTTTGC CCGGGCCGAG
CAGGAATTCG GCGTGCCGGC GCCCGTGATC ACCGCGTTTT GGGCGATGGA AACTGACTTC
GGCGCCGTAC AGGGTGATTT CAATACGTTG AACGCATTGG TGACGCTCGC ACATGACTGC
CGCCGCCCGG AAATGTTCCG GCCGCAACTC CTCGCCGCGA TCGAAATGGT TCAGCACGGC
GATCTCGATC CCGCGACGAC GACCGGTGCA TGGGCGGGCG AGATCGGCCA GGTGCAGATG
CTGCCGGAAG ATATCATTGC CTATGGCATC GACGGCGACG GCGACGGCCA TGTCAATCTC
AAGACGAGCT CTCCGGATGC GATCCTGACG GCGGCTAAAT TCATTCAGAG CCTCGGTTTC
AAGGCCGGCG AGCCGTGGAT CCAGGAAGTC CGGGTCCCGG ATCAGCTTCC CTGGGAGAAG
ACGGGCCTGC AGCCGGGAAT GACGGCCGGC GACTGGTTTG CTCTCGGCGT CACCCCGCGG
GACGGCAACA CGTCCAACAG TGCGCTCGAA GCTTCGCTCG TCCTCCCTCA GGGCCGCAAG
GGCGCCGCCT TCCTGACCTA TCCGAACTTC AACATCTATC TCGAGTGGAA CCAGTCCTTC
ATATACACCA CCTCCGCCGC CTACTTCGCG ACCCGACTGG CCGGCGCCCC CCCTTATCAG
CAGGGCAACC CGGAACCCGG GCTCGGCGAC GCCGAGATGA AGGCCCTGCA GACCCGATTG
CAGGCACTTG GTCACGACGT CGGCAAGATC GACGGGATCC TCGGCTCGGG CACGCGTGCT
GCGCTGCAGA AGGAACAGCT GAAACTCGGG CTTCCCGCGG ACGGTTGGGC AACGCAGAAT
CTCCTGGAGG CGCTCTGA
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| Protein sequence | MTGLARKALL SLGLLAVAGA PALAQAPAQP RNPAVACGGD LATFLAGIKA EAIAKGIPAD
AAERALAGAA IDQKVLSRDR AQGVFKQTFT EFSKRTVSKS RLDIGARKMR EYAEVFARAE
QEFGVPAPVI TAFWAMETDF GAVQGDFNTL NALVTLAHDC RRPEMFRPQL LAAIEMVQHG
DLDPATTTGA WAGEIGQVQM LPEDIIAYGI DGDGDGHVNL KTSSPDAILT AAKFIQSLGF
KAGEPWIQEV RVPDQLPWEK TGLQPGMTAG DWFALGVTPR DGNTSNSALE ASLVLPQGRK
GAAFLTYPNF NIYLEWNQSF IYTTSAAYFA TRLAGAPPYQ QGNPEPGLGD AEMKALQTRL
QALGHDVGKI DGILGSGTRA ALQKEQLKLG LPADGWATQN LLEAL
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