| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2035 |
|---|
| Symbol | |
|---|
| ID | 5322894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2085609 |
|---|
| End bp | 2086430 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640790972 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_001327703 |
|---|
| Protein GI | 150397236 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.968158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGATG CATGCGTCTT GGAGTCGGTC AAGCAAAGGA TGTTGTCGCG GCGCGGATTG
CTCCGTGCCG CCGCGGTCGC CACGGCAGGC CTTGCCGCCG CGAACATGGG GATCGCACCT
GCGGCGCTTG CCGCCGGCCA TGGCAGCGTC ACCGACCTCA CCCACGAGCT TCACGAAGAC
TTCCCGACCT TTTTCGGTCA GCAGCAATTC TTCCGGGAGC AGAAGTTCAA ATATTCCGAA
CACAAGTTCA ACCTGTTCGA GCTTCGGGTA AACGAGCACA CCGGCACCCA TGTCGACGCG
CCGCTGCATT TCTCCGCCGA TGGACTTTCG GTGGCGGAGC TGCCCGTCGA AAAGCTTGTC
GTGCCGCTGT GCGTCGTCGA CATCCGCGAG AAGGCGGCCG CCGATCCGGA TGCGCAGCTA
ACGCCGGATG ACATCAAGGC GTGGGTTGCC GCCAATGGAG AAATTCCGGA AAACGCCTGC
GTCGCCATGC TCTCGGGCTG GGCTGATCAT CTCGGCACCG ACAAGTTCCG CAATGCGGAC
GCGGCCGGAA AGCTGCACTT CCCCGGCTTT CATGCGGAAG CCGCCAAGCT CCTGATCGAG
GAAACCAAGG CGGCCGGCAT TGCCGTGGAC ACGCTCTCGC TCGATCACGG CGCCTCGCCG
GATTTCGCCA CCCATCATGC CTGGCTTCCG GAAGGCAGAT GGGGGCTCGA GGCAGCCGCC
AATCTCGACA AGCTGCCGGC GAAGGGTGCG ACGATCGTTC TCGGCGCGCC GAAGCACCGC
GGCGGCACGG GCGGACCGGC GCGCGTCTTC GCGCTCGTTT GA
|
|---|
| Protein sequence | MCDACVLESV KQRMLSRRGL LRAAAVATAG LAAANMGIAP AALAAGHGSV TDLTHELHED
FPTFFGQQQF FREQKFKYSE HKFNLFELRV NEHTGTHVDA PLHFSADGLS VAELPVEKLV
VPLCVVDIRE KAAADPDAQL TPDDIKAWVA ANGEIPENAC VAMLSGWADH LGTDKFRNAD
AAGKLHFPGF HAEAAKLLIE ETKAAGIAVD TLSLDHGASP DFATHHAWLP EGRWGLEAAA
NLDKLPAKGA TIVLGAPKHR GGTGGPARVF ALV
|
|---|
| |