| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2034 |
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| Symbol | |
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| ID | 5322893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2084076 |
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| End bp | 2085287 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790971 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001327702 |
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| Protein GI | 150397235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTT GGAATCAGCT CGCGATCAGC GTCGTCGTCC TCGCCGTCGG GGGCGCGGCC
TGGGTGCGTT TTGCACCCGG AGCGGGCGAG ACCTTGGCCG CGATCGGCGT TTCGCAGCCG
TTGATCGATG CCCTGTCAGG GCCGCAGGAC GGCCAAGCGG GACGCGGCGG TTCCGGTAAT
GCCGGCCGCG GGCAGGGCGG ACGCGGGCAG GGGGGGCTTG GCGGCTTTGC GGACGTTCCG
CTGGTCGTCG TCCGGCCGGC CGCGAGCTCA CTCGTCAACG ACAGACTGAA TGCCATCGGC
AACGGCGAAG CGATCCGTTC GGTTACGGTT ACGCCGACCG CAACCGGAAA CCTCACGGAA
ATACTGGTAA AATCGGGTGA CAGGATCGCG GAAGGCCAGG TAATCGCCCG TCTCGACAGC
GACGATCAGA TGATTGCTGC CGAGCAGGCA CGGTTGACCC GCGACAGCGC CCGGGAAAAA
GTCGAGCGCT ACCGCAATCT CAGCACCGCG CGCGCAGTGA CGGCGGTCGA AGTGCGTGAC
GCCGAATTTG CGCTGCAGGC GGCCGAACTG GCGCTGAAAA CGGCCGAACT CGACCTGAAG
CGGCGCGATA TCGCAGCGCC TTCAAAGGGC GTCGTGGGCA TCATCACCGT CAATATAGGA
GATTACGTCA CGACATCGAC GCCGATCGCG GTGGTTGACG ACCGTTCGCA AATCCTGGTC
GATTTCTGGG TTCCAGAGCG CTTCGCGGGC AAGATCTTCG TCGATCAGCC GGTGACCGCG
AACGCGATCG CGCGGCCAGC CCGCGCACTC CAGGGCGTTG TTCATGCGAT AGACAACCGC
CTGGACCCGG AGAGCCGAAC GCTCAGGGTC CGGGCAAGAC TCGAGAATCC GGACGACATG
CTGCGCGCCG GCATGTCCTT CTCGGTCACA GTGGCATTCG AAGGTGATCG TTATCCCACC
GTCGACCCGC TGGCGATCCA GTGGAGCTCC GAAGGATCCT TTGTCTGGCG CGTCAATGGC
GACAAGAGCG AGCGTGTGCC GATCAAAATT ATCCAGCGCA ACCCCGACAA GGTGCTCGTG
GAAGCGGAAC TCGCCGAGGG CGACCGAGTC GTCACCGAAG GCGTGCAGCG GCTGCGCGAC
GGCGGCGCCG TGCGCATTGC CGGCGAGCCT GCGGCCGAGG CCGGGCAGAA GGTTGCGGGA
GACGCGCAAT GA
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| Protein sequence | MRFWNQLAIS VVVLAVGGAA WVRFAPGAGE TLAAIGVSQP LIDALSGPQD GQAGRGGSGN
AGRGQGGRGQ GGLGGFADVP LVVVRPAASS LVNDRLNAIG NGEAIRSVTV TPTATGNLTE
ILVKSGDRIA EGQVIARLDS DDQMIAAEQA RLTRDSAREK VERYRNLSTA RAVTAVEVRD
AEFALQAAEL ALKTAELDLK RRDIAAPSKG VVGIITVNIG DYVTTSTPIA VVDDRSQILV
DFWVPERFAG KIFVDQPVTA NAIARPARAL QGVVHAIDNR LDPESRTLRV RARLENPDDM
LRAGMSFSVT VAFEGDRYPT VDPLAIQWSS EGSFVWRVNG DKSERVPIKI IQRNPDKVLV
EAELAEGDRV VTEGVQRLRD GGAVRIAGEP AAEAGQKVAG DAQ
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