Gene Smed_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2027 
Symbol 
ID5322886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2073606 
End bp2074121 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content58% 
IMG OID640790964 
Producthypothetical protein 
Protein accessionYP_001327695 
Protein GI150397228 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0688621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGG ACCATATTCG CTACGACATT CTGGCGCAGG ACGCGCTTCG CGGCGTCATT 
CGCAAGGTGT TGGCCGAAGT TTCCGCCACG GGACATCTGC CCGGCGACCA CCACTTCTTC
ATCACCTTCC TGACCGGCGC ACCCGGCGTC CGAATCTCGC AGCACCTCAA GGCCAAGTAC
CCCGAACAGA TGACGATCGT CGTCCAGCAC CAGTTCTGGG ATCTGAAGGT TACCGAGACC
GGCTTCGAAA TCGGTCTTTC ATTCTCGGAC ACCCCGGAAA AGCTTGTGAT CCCATATAAT
GCGATCCGCG GCTTCTATGA CCCCTCCGTG AATTTCGAGC TGGAGTTCGA CGTGGCCGCT
AGCGAGGAGC AAGAAACCGA TTCGGCGGAG ATAACGGCTT ATCCCGTGGA GGAAACCTCC
GAGAGCGTGA CGGACGAAAA CACCGAAAAG CCTGACGGTC CCAAAGGCGG TGGCGCTTCC
ATCGTCTCGC TCGATTCCTT CCGCAAGAAG AACTGA
 
Protein sequence
MGQDHIRYDI LAQDALRGVI RKVLAEVSAT GHLPGDHHFF ITFLTGAPGV RISQHLKAKY 
PEQMTIVVQH QFWDLKVTET GFEIGLSFSD TPEKLVIPYN AIRGFYDPSV NFELEFDVAA
SEEQETDSAE ITAYPVEETS ESVTDENTEK PDGPKGGGAS IVSLDSFRKK N