Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2027 |
Symbol | |
ID | 5322886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2073606 |
End bp | 2074121 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640790964 |
Product | hypothetical protein |
Protein accession | YP_001327695 |
Protein GI | 150397228 |
COG category | [S] Function unknown |
COG ID | [COG3814] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0688621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGG ACCATATTCG CTACGACATT CTGGCGCAGG ACGCGCTTCG CGGCGTCATT CGCAAGGTGT TGGCCGAAGT TTCCGCCACG GGACATCTGC CCGGCGACCA CCACTTCTTC ATCACCTTCC TGACCGGCGC ACCCGGCGTC CGAATCTCGC AGCACCTCAA GGCCAAGTAC CCCGAACAGA TGACGATCGT CGTCCAGCAC CAGTTCTGGG ATCTGAAGGT TACCGAGACC GGCTTCGAAA TCGGTCTTTC ATTCTCGGAC ACCCCGGAAA AGCTTGTGAT CCCATATAAT GCGATCCGCG GCTTCTATGA CCCCTCCGTG AATTTCGAGC TGGAGTTCGA CGTGGCCGCT AGCGAGGAGC AAGAAACCGA TTCGGCGGAG ATAACGGCTT ATCCCGTGGA GGAAACCTCC GAGAGCGTGA CGGACGAAAA CACCGAAAAG CCTGACGGTC CCAAAGGCGG TGGCGCTTCC ATCGTCTCGC TCGATTCCTT CCGCAAGAAG AACTGA
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Protein sequence | MGQDHIRYDI LAQDALRGVI RKVLAEVSAT GHLPGDHHFF ITFLTGAPGV RISQHLKAKY PEQMTIVVQH QFWDLKVTET GFEIGLSFSD TPEKLVIPYN AIRGFYDPSV NFELEFDVAA SEEQETDSAE ITAYPVEETS ESVTDENTEK PDGPKGGGAS IVSLDSFRKK N
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