| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1994 |
|---|
| Symbol | |
|---|
| ID | 5322853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2047308 |
|---|
| End bp | 2048435 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790932 |
|---|
| Product | exodeoxyribonuclease V |
|---|
| Protein accession | YP_001327663 |
|---|
| Protein GI | 150397196 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG CTCCGCAACA GGATGAGGCC CTGAAGGCCG TTTCGAAATG GTTAAAGGAA
GGCCGTTCTC AACTCTTCCG GCTGTTCGGC TATGCAGGGA CCGGCAAGAC GACGCTCGCC
CGCCATTTCG CAGAAAATGT GGATGGCGAG GTGGTTTTTG CCGCGTTTAC CGGCAAGGCC
GCGCAGGTGC TGCGTTCCAA GGGGGCGACG AATGCCAAGA CCATTCACTC TCTGATCTAC
CGCCCGCGCG GTGAGGAGGA GGTGGAGAAC GAGGAGACAG GGAAGACCTC GATCGCCCCG
ATGTTCGCGA TCAACCGCCA GAGCCCGGTT GCGAAAGCCG CGCTGATCAT TGTCGACGAA
TGCTCGATGG TGGACGAAGC GCTCGGCAAG GATCTGATGA GCTTTGGCAC GCCAATTCTC
GTTCTCGGCG ATCCCGGGCA GCTCCCGCCG GTTTCCGGTG GCGGCTACTT TACCAATCAG
GAACCGGATT TTCTCCTGAC CGATATCCAT CGCCAGGCGA GAGACAACCC GATCATTCAG
CTCGCCATGC AGGTGCGAGA GGGCAAGGAG ATCATGCGTG GCGACTATGG CACCGCGCAG
GTCATCCCGA AGGGCGAAGT GACACAGCCT CTGGTGCTTG AGGCAGATCA GGTCCTGGTC
GGGACGAACA GGACGCGGCG GCGCTACAAC CAAAGACTGC GAGAGCTGAA AGGCTTCACC
AGCGAATATC CGCAATCCGG CGACAAGCTC GTGTGCCTTC GCAACGATCC CGCCAAGGGG
CTGCTCAACG GTTCGCTCTG GCAGGTGATG AGCTCGTCGA AGGAAACGGT CAAGCCGGGG
ATCAACCTGA TGATCCGGCC GGAAGAAGAC GACATGAATC GGGGCGCGGC GAAGATAAAG
CTCCTGAAGG CGGCGTTCGA GGATGTCGAG GGTGAAATTC CCTGGACCAC GCGCAAGCGC
TACGACGAAT TCGACTACGG CTACGCGCTG ACCGTGCACA AGGCCCAGGG ATCACAGTGG
AACAATGTCG TGCTTTTCGA CGAGAGCTGG GCTTTCCGCG ATACGCGCGA ACGCTGGCTC
TATACGGCGA TCACGCGCGC GGCCGAGCGG TTGACGATCG TGAGGTGA
|
|---|
| Protein sequence | MQFAPQQDEA LKAVSKWLKE GRSQLFRLFG YAGTGKTTLA RHFAENVDGE VVFAAFTGKA
AQVLRSKGAT NAKTIHSLIY RPRGEEEVEN EETGKTSIAP MFAINRQSPV AKAALIIVDE
CSMVDEALGK DLMSFGTPIL VLGDPGQLPP VSGGGYFTNQ EPDFLLTDIH RQARDNPIIQ
LAMQVREGKE IMRGDYGTAQ VIPKGEVTQP LVLEADQVLV GTNRTRRRYN QRLRELKGFT
SEYPQSGDKL VCLRNDPAKG LLNGSLWQVM SSSKETVKPG INLMIRPEED DMNRGAAKIK
LLKAAFEDVE GEIPWTTRKR YDEFDYGYAL TVHKAQGSQW NNVVLFDESW AFRDTRERWL
YTAITRAAER LTIVR
|
|---|
| |