Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1988 |
Symbol | |
ID | 5322847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2038652 |
End bp | 2039836 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790926 |
Product | hypothetical protein |
Protein accession | YP_001327657 |
Protein GI | 150397190 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.324095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGC TTCGGGACGA GGCCCTCGCA TCCGGTGACG CGCACTTAGG TACGCGCTTC TGGATCTTCC CTCAGCCACC CTTCATCCCC GGCTATGAGA AGCCGGATCG CATCTGGCTG CCGATACCGC GGGACGAGAT CGGTGAGGGG CCGAGCGACG CAACGATGTA TGTGGTCGAT CCCGTCCAGG ACAAGGAACC CTACGGTCTT GACAGGCTGC CGCCGTTCCA TGGCGCTCTC CGTCTACCGG CTGCCCCGGG CCCGGACCGT CATTTCGACA ACCTTTCTCC CGATTCCCGG GCGTTCCTCC CGGTTCATGC CTATGCCTGC GTCCATTTCG TCCTCAACAT CTGGCAGAGC TATCTGGGCA GGCCGGTGCG CTGGTTCTTC GACCAGACCT TTCCGCGGCT CGAGATCGTT GCTTTCGTGA ACTGGGACAA TGCGCAGGCG GGCTATGGAT TTCTGGAGCT CGGCTGTTCC GATATAGACG GGATCAAGCG GCCCTATGCA CTGAATTTCG ACACGATTGC CCACGAAACC GGCCACCTCA TCCTGCTTTC GGAAACCGGT ATCCCGACTT CCGTTTCACG CGGCGGCGAC TTCTTCTCCT TTTCGGAGGC CTTTTCCGAT CTGGTCTCGC TGATTTCGTT CCTGCATTTC GAGTCGGCCG TCGACAGGCT GCTCAGGCGG ACCAAGGGTA ACCTCCTGCT CTATAACGAG CTCAACCGGT TTGCGGAGAC CAGCCCGGAA AGCCAGATCC GCCTCGCAAC GAATTTTAGA CGGATGTCCG AGGTTACACG CGAGGTGCAC GATCGGGCAT TGCCCTTCGT CGGTGCGATC TTCGATTCAA TTGTCGAGCT GTATCATCGC GAACTCGTGG AGCGAGACTG TGCCGATATA AGGCTGCTCG ACATCGACCT CCGGCATCTG GAGCAGGACG ATTTCGACCG ATTTCGCCAG GCGACGGCGG AGGCGTTCCG GATCAAACCG ATGGTTTTCG GTCTTGCGCT TCGGGCGGCT CGCGACGCGG TGGGGCAGGC GCTCGCAACG TCGTTGCCAT CGATCAACCC GGACACCTTG CGGCTCGATC AGGTCGCTTC CGCCGTCGTC GCCGCGGCCG GAGGGCAGGC TGCGGGGGTC CTGGAGGCCA ATTTCGTATG GCGTGAAATC ATCAGTGCGA GATAG
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Protein sequence | MRLLRDEALA SGDAHLGTRF WIFPQPPFIP GYEKPDRIWL PIPRDEIGEG PSDATMYVVD PVQDKEPYGL DRLPPFHGAL RLPAAPGPDR HFDNLSPDSR AFLPVHAYAC VHFVLNIWQS YLGRPVRWFF DQTFPRLEIV AFVNWDNAQA GYGFLELGCS DIDGIKRPYA LNFDTIAHET GHLILLSETG IPTSVSRGGD FFSFSEAFSD LVSLISFLHF ESAVDRLLRR TKGNLLLYNE LNRFAETSPE SQIRLATNFR RMSEVTREVH DRALPFVGAI FDSIVELYHR ELVERDCADI RLLDIDLRHL EQDDFDRFRQ ATAEAFRIKP MVFGLALRAA RDAVGQALAT SLPSINPDTL RLDQVASAVV AAAGGQAAGV LEANFVWREI ISAR
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