Gene Smed_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1988 
Symbol 
ID5322847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2038652 
End bp2039836 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID640790926 
Producthypothetical protein 
Protein accessionYP_001327657 
Protein GI150397190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.324095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TTCGGGACGA GGCCCTCGCA TCCGGTGACG CGCACTTAGG TACGCGCTTC 
TGGATCTTCC CTCAGCCACC CTTCATCCCC GGCTATGAGA AGCCGGATCG CATCTGGCTG
CCGATACCGC GGGACGAGAT CGGTGAGGGG CCGAGCGACG CAACGATGTA TGTGGTCGAT
CCCGTCCAGG ACAAGGAACC CTACGGTCTT GACAGGCTGC CGCCGTTCCA TGGCGCTCTC
CGTCTACCGG CTGCCCCGGG CCCGGACCGT CATTTCGACA ACCTTTCTCC CGATTCCCGG
GCGTTCCTCC CGGTTCATGC CTATGCCTGC GTCCATTTCG TCCTCAACAT CTGGCAGAGC
TATCTGGGCA GGCCGGTGCG CTGGTTCTTC GACCAGACCT TTCCGCGGCT CGAGATCGTT
GCTTTCGTGA ACTGGGACAA TGCGCAGGCG GGCTATGGAT TTCTGGAGCT CGGCTGTTCC
GATATAGACG GGATCAAGCG GCCCTATGCA CTGAATTTCG ACACGATTGC CCACGAAACC
GGCCACCTCA TCCTGCTTTC GGAAACCGGT ATCCCGACTT CCGTTTCACG CGGCGGCGAC
TTCTTCTCCT TTTCGGAGGC CTTTTCCGAT CTGGTCTCGC TGATTTCGTT CCTGCATTTC
GAGTCGGCCG TCGACAGGCT GCTCAGGCGG ACCAAGGGTA ACCTCCTGCT CTATAACGAG
CTCAACCGGT TTGCGGAGAC CAGCCCGGAA AGCCAGATCC GCCTCGCAAC GAATTTTAGA
CGGATGTCCG AGGTTACACG CGAGGTGCAC GATCGGGCAT TGCCCTTCGT CGGTGCGATC
TTCGATTCAA TTGTCGAGCT GTATCATCGC GAACTCGTGG AGCGAGACTG TGCCGATATA
AGGCTGCTCG ACATCGACCT CCGGCATCTG GAGCAGGACG ATTTCGACCG ATTTCGCCAG
GCGACGGCGG AGGCGTTCCG GATCAAACCG ATGGTTTTCG GTCTTGCGCT TCGGGCGGCT
CGCGACGCGG TGGGGCAGGC GCTCGCAACG TCGTTGCCAT CGATCAACCC GGACACCTTG
CGGCTCGATC AGGTCGCTTC CGCCGTCGTC GCCGCGGCCG GAGGGCAGGC TGCGGGGGTC
CTGGAGGCCA ATTTCGTATG GCGTGAAATC ATCAGTGCGA GATAG
 
Protein sequence
MRLLRDEALA SGDAHLGTRF WIFPQPPFIP GYEKPDRIWL PIPRDEIGEG PSDATMYVVD 
PVQDKEPYGL DRLPPFHGAL RLPAAPGPDR HFDNLSPDSR AFLPVHAYAC VHFVLNIWQS
YLGRPVRWFF DQTFPRLEIV AFVNWDNAQA GYGFLELGCS DIDGIKRPYA LNFDTIAHET
GHLILLSETG IPTSVSRGGD FFSFSEAFSD LVSLISFLHF ESAVDRLLRR TKGNLLLYNE
LNRFAETSPE SQIRLATNFR RMSEVTREVH DRALPFVGAI FDSIVELYHR ELVERDCADI
RLLDIDLRHL EQDDFDRFRQ ATAEAFRIKP MVFGLALRAA RDAVGQALAT SLPSINPDTL
RLDQVASAVV AAAGGQAAGV LEANFVWREI ISAR