| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1959 |
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| Symbol | |
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| ID | 5322818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2010852 |
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| End bp | 2011796 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790897 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001327628 |
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| Protein GI | 150397161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.874851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.400976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGAG GCGGAGAGTT CTTTTGCGCG GCGGCGCTGG CGGTAGCGAT GACTGCGCCG
GCAGCCGCGG CGGATCTGGT AATCGCGATG CCGCCGTGGC CGTCAGGTCA GGCGGCGGCG
AACATCCTCA AATTCGGCAT CGCCAAGAAA TTCAGCCTCG ATGCGGAGGT GCGGGAACTC
GGTACGCTCA ACGCTTTCGT CGGCCTAGAG AAGGGCGAAA TCGACATCCA GCCGGAGGTT
TGGCGGCCAA ATTTCGACGA GCTCGTCCGC AAGTTCGTGA CCGAAAAGGG CGCCGTGACG
CTGAGTACGC GTGCGGTACC TGCATGGCAG GGGATTTGCG CCACGCCGGA GGCGGCCGCG
ACGATCAAGA CCGTTGCGGA TCTCGGCGAC CCGGCCAAGA CGAAATTCCT GGACACCGAC
GGTGACGGAC GCGGAGAAAT GTGGATCGGC GCCGCCGAAT GGCTTTCGAC CGGAATCGAA
CGTGCGCGGG CGGCCGGCTA TGGCTATGCG GCAAACCTGA CGCTTGTCGA GGCCAAGGAA
GATGTTGCAA TGGCGGCGGT GGATGCGGCA ATCGCGACGG CGCGGCCGAT GGTCTTCTAC
TGCTACGCTC CGCATCATGT TTTCAAGCTG CACCAGATCT CCCGGCTTGA GGAGCCGCCC
CATGATCCTT CCAAATGGAA AATCGCGCCG CCGAACGATC CGCTATGGGT CAGCAAGTCG
AGCGCGTCCA CGGCCTGGGA CGCGGGCCAG TTCCAGATCG GCTATGCGAC GGCTTTTGCA
AAGAAACATC CCGAAGTCGC GCAGTTCCTT CAGAATGTGG ACTTCTCCCC GGATGAAGTG
ACGGCGATGA GTTATGCGCT CCAAGTCGAG CGGCAGACGC CGGTGGACTA CGCCAGGAAG
TGGGTTGAAA GCCACGCGGA ACGGATCGAC GGATGGGCGA AATGA
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| Protein sequence | MRRGGEFFCA AALAVAMTAP AAAADLVIAM PPWPSGQAAA NILKFGIAKK FSLDAEVREL
GTLNAFVGLE KGEIDIQPEV WRPNFDELVR KFVTEKGAVT LSTRAVPAWQ GICATPEAAA
TIKTVADLGD PAKTKFLDTD GDGRGEMWIG AAEWLSTGIE RARAAGYGYA ANLTLVEAKE
DVAMAAVDAA IATARPMVFY CYAPHHVFKL HQISRLEEPP HDPSKWKIAP PNDPLWVSKS
SASTAWDAGQ FQIGYATAFA KKHPEVAQFL QNVDFSPDEV TAMSYALQVE RQTPVDYARK
WVESHAERID GWAK
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