| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1955 |
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| Symbol | |
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| ID | 5322814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2006980 |
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| End bp | 2008206 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790893 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001327624 |
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| Protein GI | 150397157 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.479896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0640255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACT GGGAAAGCAT TTTTGCCACG CGCTCGAACC GGATGAGAGC CTCCGAAATC
CGTGAGTTGC TGAAGCTGCT GGATCGTCCC GAAATCATCT CGTTTGCCGG CGGTATTCCC
GACCCGGAGC TTTTTCCGAA CGATGCGTTC AAGGAAGCGT ATGCCGAAAT CTTCGGTGGC
CCGACCGTCG GCGCAGCACT GCAATATTCG GTAAGCGAGG GCTATCGCCC GCTTCGCGAG
TGGCTCGCTG GTCAGATGGC GGCAATCGGC ATTCCGGCGA GCGTCGACAA TATCTTCATC
ACCTCCGGGT CGCAGCAGGG GCTCGATTAT CTCGGCAAAC TGTTTCTGTC GCCGAAAGAT
ACGGCGCTGG TGACCTGGCC GACCTATCTC GGTGCACTGC AGGCCTTCAA CGCCTACGAG
CCGACCTACG ATCAGCTGAA CCCCGCCGGA AATCGCACGC CGGGGGCCTA TGCCCAGGCG
GCCGAGGAAG GCGGTGGGCG CGTCAAGTTC GCCTATCTCT CGGCCGATTT CGCCAACCCG
ACCGGCGAGA CGGTGGATCG CGCCGGTCGC GAGCGTGTGC TCGCGCTTGC CGAGGAGCTC
GACATCGCCG TCATCGAGGA TGCGGCCTAC CAGTCGCTGC GCTATGACGG CGAGGCGGTT
CCGCCGATCC TGGCGTTGGA GATCGCCCGC AAGGGCGACA TAAACAACAC CCGCACAATC
TATTGCGGCA GCTTCTCGAA GACGCTGGCG CCGGGCCTTC GCGTCGGCTG GATCTGTGCC
GCCGAGCCGG TGATCCGCAA GCTGGTGCTG ATGAAGCAGG CCGCGGACCT TCACTCTTCG
ACGATCAATC AGATGGCGAT CGCGACGGTC GCCGAGCGCG GCTTCGATGA GCAGGTGAAG
AAAATTCACG GGGCCTACAG GCAGCGCCGC AACGCCATGC TCTTGGCGCT CGAGAGATAC
ATGCCTGCTG GCGTCACCTG GACGAAGCCC GAAGGCGGCA TGTTCATATG GGTAACCTTG
CCAAAGGGCA CCGATGGCGC GGAGCTGCTC GCCAAATCGA TCGAGACAGC CAAGGTGGCC
TTTGTACCAG GCCGCGCCTT CTTCGCTGAC GGCTCAGGTG AAAACACGCT GCGGCTCAGC
TTCTCCTGCG CCAACGGCAG GATGATCGAC GAGGGCATCC GCCGACTCGG CGACCTCGTC
CGCGGCGAGG TTGCACAGGC GGCGTAA
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| Protein sequence | MLNWESIFAT RSNRMRASEI RELLKLLDRP EIISFAGGIP DPELFPNDAF KEAYAEIFGG
PTVGAALQYS VSEGYRPLRE WLAGQMAAIG IPASVDNIFI TSGSQQGLDY LGKLFLSPKD
TALVTWPTYL GALQAFNAYE PTYDQLNPAG NRTPGAYAQA AEEGGGRVKF AYLSADFANP
TGETVDRAGR ERVLALAEEL DIAVIEDAAY QSLRYDGEAV PPILALEIAR KGDINNTRTI
YCGSFSKTLA PGLRVGWICA AEPVIRKLVL MKQAADLHSS TINQMAIATV AERGFDEQVK
KIHGAYRQRR NAMLLALERY MPAGVTWTKP EGGMFIWVTL PKGTDGAELL AKSIETAKVA
FVPGRAFFAD GSGENTLRLS FSCANGRMID EGIRRLGDLV RGEVAQAA
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