Gene Smed_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1933 
Symbol 
ID5322792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1986169 
End bp1986918 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID640790871 
ProductNUDIX hydrolase 
Protein accessionYP_001327602 
Protein GI150397135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC TTGAAACCGA TCGTGCGCAA TGGCCCGTCG AAGGGAAGAT CTTTCCGGTC 
TCGGACATCG AAATAGAGGT CGCGGCCGAG CCACACCCGT TTCATCTGGC AGAGGCGGAG
AAGGCGCGGG AAAGCTGGCA AAAGGAAATC GCCGTGAATC CGCACCTGTT CGACGGCAGG
ATGGTGCTGC AGCGATCGGT TCTGGTTGCC GACGGTCGTA TCCGGGCGCG AGCCCATATC
GTCCCCTATT CTACCTTCCT CTGGTGGCGG AAAACGAGGG CGCCGGGGGC AAGCCACATT
TTCGGCATGC CGATGCTCGT TTCCTCGGAC GACGCCCTGA TTGCCATTCG CATGGGTGCA
CACACGGCCA ATCCGGGGCG GGTCTATAGC CCGGGTGGTT CGCTCGAGCC GGAGGATATC
GTCGACGGGC GCTGCGATGT CGCTCGCAAC ATCGCGCGCG AGGTAAAGGA GGAGACTGGC
ATTTCGCTCT CCGAGGCAAC CGCAGAACCG GGTTGGCACG CCATCCACAT GGATGGCACG
CTTACGGTGT TCCGCGTGTT TCGACTGGCG GCCACGGCCG AGGACATCGT TGCCCGAGTG
GCGGAGCATG TCGCTTCCGA TCCGCATCCG GAGATCGACG AGGCGGTGGC GATCCGTGAG
CCGGAGCCGA CCGCACATAA TTATCCCGAG TTCATCCCAC CGATACTCGA TTGGCTTTTT
GCGCGCATCC GGGGGCAGCA GATGGCGTGA
 
Protein sequence
MTLLETDRAQ WPVEGKIFPV SDIEIEVAAE PHPFHLAEAE KARESWQKEI AVNPHLFDGR 
MVLQRSVLVA DGRIRARAHI VPYSTFLWWR KTRAPGASHI FGMPMLVSSD DALIAIRMGA
HTANPGRVYS PGGSLEPEDI VDGRCDVARN IAREVKEETG ISLSEATAEP GWHAIHMDGT
LTVFRVFRLA ATAEDIVARV AEHVASDPHP EIDEAVAIRE PEPTAHNYPE FIPPILDWLF
ARIRGQQMA