Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1864 |
Symbol | |
ID | 5322722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1937283 |
End bp | 1938443 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640790801 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001327533 |
Protein GI | 150397066 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0158194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.397812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGAGCA ATAAGATCCT GTCTATGGAG TCACGGGCCC CCGCGCTGAA AGTGCGGGAC TGGGTACGTG GTGAGCCCCT TGCGAGCTTC CAGCCGGGTA AATTGTACAT TCTTGAATTT TGTGGAACCA CATGTGACGG TTGTGAGCGG GCGATGCTCA ATCTGATAGA GCTGCAGGAG AGTTATAAGG ACAGTGGAGT TGAGGTCGTC ACGGTCGCGG CACACGAAAG CGCTGCATCC TCCGATGAGG CCCGAGGCAA GCTTGACGCG TGGTTGGCTA AGTTCCCGGA GTTGAACTTT CCAGTCGCGT TCGACGACAC AGGCGCAATG AACACGCTAT GGATGGAGCC GAGTTTTTCG ATCGTGATTC CGAGGCTGTT CGTGATCGAC CGAGACGGCT ACATTGCCTT TATCGGCCAT CCGGACAAAC TGCACGACGT TCTTCCGCAC TTGCTGGACG GCACCTGGCG CACCAGCGCT CAAGCGAAGG CAACGGAAAG CGAGCGCATC GCCGAAGATG AACCAAAAGC GCGCAAGCAT GCGTTGTTGA AGCCGATCAG AGGCAAAAGA AGGGCAGCGG AGGGAATAGG GGATTGGATG ACGGCCCTTA CGGCGGTCGA AGAGGGCATC GCCCTTGATC CGGACAGCTA CAATTTACGC GCGTATCAAG TCCATCTGCT ACTTGATAAA ATGTGGGACA TGGAAAATGG CTTGGTGGTG CTATGGCAAT TCGTTCGCGA AGCCATCGAC AGAGGCGACG CACATTGGCT GGTTACGGCG ATGATGCAAA TCTTCCGTCA GAGCCTTCCC TCTGCCGAGC GTTTCGCGAT GGGCGAGGTG CTATCAGAAC ACATCCTGGC CCTGGATCTC GCGCAATGCA ATCTCCCCGC GTCCCAGCTT TTTCCGAAGG TGGCCCGCCA CTACTATGAG ATCGGCAACA AGGACCGCGC CGTCGAGTTG CTCGAGCTGG CGCTGAAGTC GCTGGAGGGG CATGGAGCGA AAGAACGCCC TCAACTAGAT CTGCTGCAGA CTCTGGCCAA TTACAAGGGC GAGACGGTTT GTTCCGGTGA TGTTTGTGTG GTCCCGCGGA CGAATATTTC GACCGGTGCC ACGCCAAAGG CGGAGACGAA GAACCTCGAT GAAAGAGGAG CTCTTGAATG A
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Protein sequence | MESNKILSME SRAPALKVRD WVRGEPLASF QPGKLYILEF CGTTCDGCER AMLNLIELQE SYKDSGVEVV TVAAHESAAS SDEARGKLDA WLAKFPELNF PVAFDDTGAM NTLWMEPSFS IVIPRLFVID RDGYIAFIGH PDKLHDVLPH LLDGTWRTSA QAKATESERI AEDEPKARKH ALLKPIRGKR RAAEGIGDWM TALTAVEEGI ALDPDSYNLR AYQVHLLLDK MWDMENGLVV LWQFVREAID RGDAHWLVTA MMQIFRQSLP SAERFAMGEV LSEHILALDL AQCNLPASQL FPKVARHYYE IGNKDRAVEL LELALKSLEG HGAKERPQLD LLQTLANYKG ETVCSGDVCV VPRTNISTGA TPKAETKNLD ERGALE
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