Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1815 |
Symbol | |
ID | 5322673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1896639 |
End bp | 1897745 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640790753 |
Product | hypothetical protein |
Protein accession | YP_001327485 |
Protein GI | 150397018 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0928113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00117602 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAATT CCTACCTGTT CGGCGGCAAT ACGAGAGAGA CACCCGAATC CGTCAGGCGC AAGCGCCAAC TTGCCATGGC GATCATGGGG ACGGCCGCAC CGAAAAACAT CGGCGAGGGA CTGAACGCAC TGGGCTCGGG CATCGTCGCA GGCATCATGA ACCGCCGGGC GGACAGGGCG GAAGACGAGG GCCGCAGCGC TGCCCGCGCC GCCTATGACG GGGCTCTTGG CGGCATGCCG GACCGGCAGG TCTCCAATGC GAGCGCATCC GCAGCGGCTC CGTCAAACTC CTCGCATTAT CGCGACGCCA TCGCCTCGCT GGAGAGCGCA GGAAGCGGGG ACTATACGGC TATCGGACCG ATGCATCCGA AACTTGGGCG TCCGCTCGGG CGATACCAGA TCATGGAAGC GAATATCGGA CCCTGGTCCC GCGAGGCGCT GGGGCGCGAG GTGACGCCGG AAGAGTTCCT GTCGAGCCCC GAAATCCAGG ACGCCATTTT CGACCACAAG TTCAATGCCT ATGTGCAGGA ATTCGGACCG GAAGGCGCCG CGCAGGCATG GTTTGCCGGT CCGGGCGGCG TCGGCAAGAC GAGCCGCAAG GACGCGCTGG GAACCGATGT CGGCACCTAT GGCCGCAAGT TCATGAACGT GCTCGGCCCG CGGGGTGAGC CGACAGAGGC CGGCAGAGCC GAGCCGCCGG CAGGAATGCC TCCGCCGCCT CCGGCGTCCC ACTCGCCCTT CGTGCCTTCG TTCCCAGGCA AGGAAGCGGA CGACCGGATA GCGGCTCCCT CCCTGACGCC GCCGAATGCG CGTCCCCCGG AACAGGCAAT TCCGGCGCAG TTCCAGGGTT CTCGGCAGCT CGCCAATGCC CAGGGCGGCA TCATGCCGGC GCTGATGGAC GGCACGCCTG CCTCGCCCGA GCAGGTGGCG CAGGCGCAGG CGATCGGCCG GCGGCAACAG GCACAGGCGC AAGCCGCCGA TCTGATGCCG TTGCTCGAGG CCATGGGCAA TCCCTGGCTC TCGCCCGAGG AGAGGGCGGT TCTGCACAGG CTCTACGAGC AGCAGGTGCA GTCAGCAGAG GCCCGGCGCA ACCCGCGGTG GGAATAG
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Protein sequence | MANSYLFGGN TRETPESVRR KRQLAMAIMG TAAPKNIGEG LNALGSGIVA GIMNRRADRA EDEGRSAARA AYDGALGGMP DRQVSNASAS AAAPSNSSHY RDAIASLESA GSGDYTAIGP MHPKLGRPLG RYQIMEANIG PWSREALGRE VTPEEFLSSP EIQDAIFDHK FNAYVQEFGP EGAAQAWFAG PGGVGKTSRK DALGTDVGTY GRKFMNVLGP RGEPTEAGRA EPPAGMPPPP PASHSPFVPS FPGKEADDRI AAPSLTPPNA RPPEQAIPAQ FQGSRQLANA QGGIMPALMD GTPASPEQVA QAQAIGRRQQ AQAQAADLMP LLEAMGNPWL SPEERAVLHR LYEQQVQSAE ARRNPRWE
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