Gene Smed_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1801 
Symbol 
ID5322659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1885756 
End bp1886217 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID640790739 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001327471 
Protein GI150397004 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00074845 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCTG GAGAACTGCC CTGGCATGGG GGGTGTCGCT GCGGGCAGGT GCGCATCAAA 
GTGAATGCGC GGCCGCTGGT CACCATGGCG TGTCATTGCA CGGGCTGCCA GCGAATGACC
AGCAGTGCGT TCTCGCTGAG CATTGCCATA CCGAGCGAAG GGTTCGAGGT CACGAGCGGC
GAGCCGGTCA TCGGTGGCCT TCACGGTGCG ACTCGCCACT ATTTTTGCCC TCACTGCATG
AGTTGGATGT TCACGCGCCC AGAAGGCATG GACTGGTTCG TGAATCTTCG AGCAACTCTG
CTCGATGATG CCCGCTGGTA CAGGCCTTTC ATCGAGACCT GGACATGCGA GAAACTCCCC
TGGGCGAACA CATCCGCCAT TCATAGCTAC AAGGCGCTGC CACCGCTGGA AGATTTCGAA
CAGTTGCTCG CGGACTATGC CAGGTATTTC GAAGAGAATT GA
 
Protein sequence
MSAGELPWHG GCRCGQVRIK VNARPLVTMA CHCTGCQRMT SSAFSLSIAI PSEGFEVTSG 
EPVIGGLHGA TRHYFCPHCM SWMFTRPEGM DWFVNLRATL LDDARWYRPF IETWTCEKLP
WANTSAIHSY KALPPLEDFE QLLADYARYF EEN