Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1801 |
Symbol | |
ID | 5322659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1885756 |
End bp | 1886217 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640790739 |
Product | glutathione-dependent formaldehyde-activating GFA |
Protein accession | YP_001327471 |
Protein GI | 150397004 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00074845 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGCTG GAGAACTGCC CTGGCATGGG GGGTGTCGCT GCGGGCAGGT GCGCATCAAA GTGAATGCGC GGCCGCTGGT CACCATGGCG TGTCATTGCA CGGGCTGCCA GCGAATGACC AGCAGTGCGT TCTCGCTGAG CATTGCCATA CCGAGCGAAG GGTTCGAGGT CACGAGCGGC GAGCCGGTCA TCGGTGGCCT TCACGGTGCG ACTCGCCACT ATTTTTGCCC TCACTGCATG AGTTGGATGT TCACGCGCCC AGAAGGCATG GACTGGTTCG TGAATCTTCG AGCAACTCTG CTCGATGATG CCCGCTGGTA CAGGCCTTTC ATCGAGACCT GGACATGCGA GAAACTCCCC TGGGCGAACA CATCCGCCAT TCATAGCTAC AAGGCGCTGC CACCGCTGGA AGATTTCGAA CAGTTGCTCG CGGACTATGC CAGGTATTTC GAAGAGAATT GA
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Protein sequence | MSAGELPWHG GCRCGQVRIK VNARPLVTMA CHCTGCQRMT SSAFSLSIAI PSEGFEVTSG EPVIGGLHGA TRHYFCPHCM SWMFTRPEGM DWFVNLRATL LDDARWYRPF IETWTCEKLP WANTSAIHSY KALPPLEDFE QLLADYARYF EEN
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