Gene Smed_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1769 
Symbol 
ID5322627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1853294 
End bp1853701 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID640790707 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_001327439 
Protein GI150396972 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0361346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA TCAATATCAG CATTGCCGGA GAACCCGATC CGGAACGTTC CACGAAAATA 
GCGGCAAGGC TAAGCGAGCT TACGCAATCG CATCTCCGTA AGGACCCGTC GGTAACGGCT
ATCATAGTCA CCTATGTCGA TCCGCGGCAT TGGTTCGCCG GCGGCAAATC GATCGCATCG
CAGCAGCTCG ACAGTTTCTG GCTCGATATC AAGGTCGTCG ACGGCACCAA TACGAAACAG
GAACTCGCCG GATATATCGA GGCGACCTTC GGTGCCTTCG AGGAATTTCT CGGAAAGCTC
CATCCGGAAA GTTACGTACT CGTGCATGAA GTACCCGCCG CGGCTTACGG CTATGGAGGC
AAGACTCAGG AGTTTCGCTA CATCAGCGGC AGACTGGCCG CTTCGTGA
 
Protein sequence
MPIINISIAG EPDPERSTKI AARLSELTQS HLRKDPSVTA IIVTYVDPRH WFAGGKSIAS 
QQLDSFWLDI KVVDGTNTKQ ELAGYIEATF GAFEEFLGKL HPESYVLVHE VPAAAYGYGG
KTQEFRYISG RLAAS