Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1764 |
Symbol | |
ID | 5322622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1847812 |
End bp | 1848627 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790702 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001327434 |
Protein GI | 150396967 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.718391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0637777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTATT GCGACGACGA TCTTCGGCGT TTCGAAGCGG AGGGGGCGGC GGCTCTGCCT CCTGCCGCGG AACAGGGCTT TGTCGAGCAC GATGGCGCCC GAATATGGTT TTCGATATAC GGCGCCGGAA CACCGGTGCT CCTCCTGCAC GGCGGCCTCG GCCACAGCGG CAACTGGGGC TATCAGCTTG CGCCGCTTCT CGAGGCGGGC CACCGCGTCG TGCTTGTCGA CAGTCGCGGA CATGGGCGCA GTACGCGCGA TAAGCGGCCT TACAGCTATG AATTGATGGC ATCCGATGTG CTTGCGGTCA TGGACAGGCT GCAGCTCCAC AACGCGGCGT TGGTAGGCTG GAGCGACGGG GCATGCATCA GCCTCGTTCT TGCAAGGCAG GCTCCCGCGC GGATTGCCGG CGTCTTTTTC TTCGCCTGCA ACATGGACCC GAGCGGCACA AAGGCGTTCG AGGCGACACC CGTCATCGAC CGTTGCTTCG CCCGCCACCG GAAGGACTAC GCCGAATTAT CGGCCACGCC GGATGATTTC GATGACTTTG TCGCGGACGT CGGCGAGATG ATGCGGACGC AACCCGATTA TTCGGCAGCC GATCTTTCCG CGATCCGCGT GCCTGTCGCG ATCGTGCATG CAGAGAAGGA CGAGTTCATA AAAATGGAGC ACGCCGAGTA TCTCGCCCGG AGCATTCCCT CGGCCGAACT GATTCCGCTT CAAGGCGTCA GCCACTTTGC TCCGCTGCAG AGACCGGAAG TGTTCAATGG TGCCATGCTT GCGTTCCTGG AGCGAATACG TCCCGCGGGT AGTTAG
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Protein sequence | MHYCDDDLRR FEAEGAAALP PAAEQGFVEH DGARIWFSIY GAGTPVLLLH GGLGHSGNWG YQLAPLLEAG HRVVLVDSRG HGRSTRDKRP YSYELMASDV LAVMDRLQLH NAALVGWSDG ACISLVLARQ APARIAGVFF FACNMDPSGT KAFEATPVID RCFARHRKDY AELSATPDDF DDFVADVGEM MRTQPDYSAA DLSAIRVPVA IVHAEKDEFI KMEHAEYLAR SIPSAELIPL QGVSHFAPLQ RPEVFNGAML AFLERIRPAG S
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