| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1761 |
|---|
| Symbol | cobU |
|---|
| ID | 5322619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1843207 |
|---|
| End bp | 1843734 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640790699 |
|---|
| Product | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase |
|---|
| Protein accession | YP_001327431 |
|---|
| Protein GI | 150396964 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.372687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0770825 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTT CCTCCGTCGG CCCCACCCTC GTGTTGGGCG GCGCTCGCTC CGGCAAATCC
AGTTTCGCAG AAAAGCGCGT CGAGACCTTC GGGTTGCCGA TGCATTACCT TGCGACGGGC
CGGGCTTTTG ACCAGGAGAT GCGGGAACGC ATCGTCCTTC ATCAGGCTGC ACGGCAGGGC
AAGGGCTGGA CCACCCATGA GGAACCGCTC GAGCTCGTGG GACTGCTTCG CCGAATCAAT
GATCCCGGGC GTGCTGTCCT CATCGACTGC CTGACCCTGT GGGTGACCAA CCTGATGATG
GAGGAGCGCG ACATGGACGC TGAATTCGCA GCGCTCGCCG CCTTCCTGCC CGAGGCACGC
TCGCGCCTCG TGTTCGTTTC AAATGAGGTC GGTCTCGGAA TTGTCCCGGA CAATCGGATG
GCGCGCGACT TTCGCGATCA CTCCGGCCGG CTCCACCAGA TCGTGGCGGA GAAATCCGCA
GAAGTTTACT TTGTCGCGGC CGGACTGCCG CTGAAAATGA AGGGTTGA
|
|---|
| Protein sequence | MATSSVGPTL VLGGARSGKS SFAEKRVETF GLPMHYLATG RAFDQEMRER IVLHQAARQG
KGWTTHEEPL ELVGLLRRIN DPGRAVLIDC LTLWVTNLMM EERDMDAEFA ALAAFLPEAR
SRLVFVSNEV GLGIVPDNRM ARDFRDHSGR LHQIVAEKSA EVYFVAAGLP LKMKG
|
|---|
| |