Gene Smed_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1705 
Symbol 
ID5322563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1783203 
End bp1784003 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID640790643 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001327375 
Protein GI150396908 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG TGGATCATGA CGTGCTGATC GCAACGCTCG ATCGGCTGAA GCTGACGGCG 
ATCCGCGACC AGCTCGACAC GTTGCTGGAC GAGGCGGCTC GTTCGAAGAT GACCTTGCGC
GAGGCGCTGG CTTTCCTTGT GTCGCGCGAG ATTGCCCGGC GCGACGAGCG GCGGATATCG
ATGTCGAGCA AGCTGGCGCA GTTCCCGTTC GTGCGCGAAT TGGACGGCTT CGACTTCGAG
GCGCAGCCCT CGCTGGATCA GGGGCAGATC AGGGAGCTTG CGACCTGCCG CTGGATCGCT
CACGGTGATA CCGTACTCTT CCTTGGACCG CCCGGTACAG GCAAGACGCA TCTGGCTGTG
GGCCTCGGCC GCGAGGCCAT CCGCCAGAAT TACAACGTCC AGTTCGTCAC GGCGGCCACG
CTAGTGGCGA TGCTGGCGAA GGCTCACAAC GACGGCTCGC TCGACAAACA GTTGACGATC
CTGTCGCGGC CGAAATTGCT GATCATCGAC GAGCTGGGTT ACTTGCCCTT CGAGGCCAAT
GCCGCCCACC TGTTCTTCCA ACTGGTGTCT CGGCGCTACG AGAAGGGCTC GATCCTGATC
ACCTCAAACC GTTCCGTGGG CGAATGGGGA AGTGTTTTTG GCGACCCTGT CGTCGCCACG
GCGATATTGG ACCGCCTGCT TCACCACTCG ACGGTGATCA CCATCCGGGG CGACAGCTAT
CGGCTTCGCG AAAAGCGCCG CTCCGGCCTT CTGCAGAAAG CCGGAGCGGC GCTCCAACCC
AACGAAACCG CAAACCAATG A
 
Protein sequence
MTNVDHDVLI ATLDRLKLTA IRDQLDTLLD EAARSKMTLR EALAFLVSRE IARRDERRIS 
MSSKLAQFPF VRELDGFDFE AQPSLDQGQI RELATCRWIA HGDTVLFLGP PGTGKTHLAV
GLGREAIRQN YNVQFVTAAT LVAMLAKAHN DGSLDKQLTI LSRPKLLIID ELGYLPFEAN
AAHLFFQLVS RRYEKGSILI TSNRSVGEWG SVFGDPVVAT AILDRLLHHS TVITIRGDSY
RLREKRRSGL LQKAGAALQP NETANQ