| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1662 |
|---|
| Symbol | |
|---|
| ID | 5322520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1752210 |
|---|
| End bp | 1752956 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640790602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327334 |
|---|
| Protein GI | 150396867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.222644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.18577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG CTCAGATCAA AGTCGATCTC CAGCAGTTCA ATCGATCCCT GACGGACATC
GAGCGAAAAC AGCTTCCCTA TGCCATCATG CTCACGCTGA ACGAGACGGC CAAGGGTGGT
CGCCTCGAAG TCCAGCGGGA AATGGAGCGG GTCTTCGAGC GGCCAACGCC TTACGCAAAG
CGTGGCGTTG TATATGACCG CGCATCGCGG CAGAACCTGC GGGCGGCGGT TGTTGTGACC
GGCGACCGGA CGAAGGGCGG CTTGCCTGCG ACGGCATTCC TCGGGCCGCA GATCGAAGGT
GGCATGCGTA CCCATAAGGC CTTCGAGCGG CAGCTCGTCG ACCGCGGATT GATGCAGCGG
AACCTGGTGG CGGTGCCAGC AAAGCGGGCG CCGCTCGATC GCTACGGCAA CATGACGCAA
GGCTTTCTCA ACCGCGTGAT GGCCGACCTG CAGATCGATT ACCGTGGTGC TGGTGCTACC
CGTACCCGCA CCTCGTCGTC GCTCAAGCGG AACAAGAACT ACAAGAACGC GCGGTTCTTC
GTGCCGAGGC AGCCTTCGCA CCTCTACCCC GGCGTTTACC AGCGAGACCC GGCAACGAAC
GCCATCCATC CGGTAATCCT GTTCGTACCT CAGGTCTCCT ATCGCGTCCG CCTTCGCCTG
CGTGAAGTCG TCGAGCGGTA CGTGGTCGCC AACGTCCACG ATCATTTCGC CGTCGCCTTC
CAGCGGGCGG TGCGGACGGC CCGATAG
|
|---|
| Protein sequence | MIDAQIKVDL QQFNRSLTDI ERKQLPYAIM LTLNETAKGG RLEVQREMER VFERPTPYAK
RGVVYDRASR QNLRAAVVVT GDRTKGGLPA TAFLGPQIEG GMRTHKAFER QLVDRGLMQR
NLVAVPAKRA PLDRYGNMTQ GFLNRVMADL QIDYRGAGAT RTRTSSSLKR NKNYKNARFF
VPRQPSHLYP GVYQRDPATN AIHPVILFVP QVSYRVRLRL REVVERYVVA NVHDHFAVAF
QRAVRTAR
|
|---|
| |