| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1658 |
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| Symbol | |
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| ID | 5322516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1747412 |
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| End bp | 1749136 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640790598 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_001327330 |
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| Protein GI | 150396863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0805551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.257873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG ACGTCACGAT CCTCGGCCCC GATGCGAAGC CGCTTTCGCC GGCAGTTCGT
GCCGCTGCCC GCGTGCAGGT TGCGAGAAAC CGGCTGATGG CGTCTTCGGC CTACCAAGGT
GCATCCTACG ATCACCCGTC CTTCGCCAAA TGGCGGCCGG GCACCTGGTC CGGGCAGTCG
GCGCTGACCT GGTCGCGCTC CGAGCTGGTC GACCGGCTGA ACGACGTGGC GCGCAATGAC
GGCTGGGGTG CCGCCGGCAC CTCGCGCCTC GTCGACAACA TCATCGGCTC GGGCTGGACG
CTTGCGGCGC GGCCGAACCA CGTCTCGCTC AACATGACCT TTGAGCAGGC GGAGGAGATC
GCCGACAAGA TCGAGGCCCT GTGGCGCGAT TACACGCAGG ACGTCGACAA ATGGTGCGAC
GCCGAGCGGA CGAAAACCAT GGCCGGCGTT CTCGGCCTTG CTGCCCGTCA GCGGTTTGGT
CCCGAGGGCG AGGCCTTCGG CGTCATCGTC TGGCAGGACA ATGCACCGTT GTTCCAGACG
GCAATCCATG TCGTCGATCC GGCCCGGTGT TCAAACCCGA ACGGGCGCAT GGACGAGGAG
TTCCTGCGCG ACGGCGTTGC CATCGACGGA TACGGCGCAC CGGTCGGCTA CCACTTCCGC
AAGTCGCATC CCGGCGAGTT CTTCGCCGGC AATACCGGCC TGTGGCATTG GGAGTATGTC
GATCGGGAGA CCGAATGGGG GCGCCCGATC GTCGTTCACG CCTACGAGCA GAAGCGCGCC
GGCATGACGC GCGGCGTTTC CGACTGGGCT CCGGTCATGC GGTCGATCAA GCAGTCGACC
GACTACGAGG ACTATGAGAG CCAGGCGGCA ATGCTGAACG CTGTCATGGC TGCCTTCATC
GAAACCCCCT TCGATCCGGA AGAGATGCTC GAGGCGATCG GCGCGGATTA CGGCAATGAC
GGCATCGCCA AGCTCTTCGG CGAAATGTCG GCCGCGCAGA AGGCCTATTA CGGCGCCGCA
CCGATCGATT TGCCCGGCGT TCGTATCAAC ACGCTGCAGC CCGGCGAAAA GGCGACGCTG
ACCAAGCCGG AGCACCCGAA CGCCAATTTC GAGGCCTTCG TCAATGCGGC GCTGCGCAAG
GTCGCGAGTG CGATCGGCGT CACCTACGAG CAGCTCACCA TGGACTGGAG CCAGGTGAAC
TATTCGTCGG CGCGCGCGGC ACTCCTCGAG ATCTGGCGCG GCTTCACCGC CAAGAAGGGC
GGCTTCGCCT CGCAGTTCAT GGCACCGATC TATCGGGCAT GGCTCGAGGA GGTGTTCGAC
AAGGGCCTGA TCGAGCTCCC GGCGGGAGCC GTTCCTTTCG AGCTGAACCC GGCAGCATGG
TGCCATGCGG ACTGGATCGG CCCCGGCCGC GGCTGGATCG ATCCGCTGCG CGAGGCGCAG
GCTGCCAGCG AGCGGCTCGC CGGCAATCTG ACCACGCTCC AGCAGGAAGC GGCCGAGCAG
GGGCGGGACT GGAAGATGGA TGCGCAGCAG CGCGCCCGGG AACGGGCCTT CTACGAACGG
CTCGGGCTCG ATCCAGATCC TGGCAAGCCC GAAGCCAGAT CGCAGGCGAG TGCCGCTCCG
CCAGCCGAGC CCGGCGACGA GGCCGAGGAA GAGGTCAACG GACGGACCTC GGCGCGGCGC
CATCCTGCCG GCATCCCGAG GATTGCCAGA AGGAAAACGG CATGA
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| Protein sequence | MSGDVTILGP DAKPLSPAVR AAARVQVARN RLMASSAYQG ASYDHPSFAK WRPGTWSGQS
ALTWSRSELV DRLNDVARND GWGAAGTSRL VDNIIGSGWT LAARPNHVSL NMTFEQAEEI
ADKIEALWRD YTQDVDKWCD AERTKTMAGV LGLAARQRFG PEGEAFGVIV WQDNAPLFQT
AIHVVDPARC SNPNGRMDEE FLRDGVAIDG YGAPVGYHFR KSHPGEFFAG NTGLWHWEYV
DRETEWGRPI VVHAYEQKRA GMTRGVSDWA PVMRSIKQST DYEDYESQAA MLNAVMAAFI
ETPFDPEEML EAIGADYGND GIAKLFGEMS AAQKAYYGAA PIDLPGVRIN TLQPGEKATL
TKPEHPNANF EAFVNAALRK VASAIGVTYE QLTMDWSQVN YSSARAALLE IWRGFTAKKG
GFASQFMAPI YRAWLEEVFD KGLIELPAGA VPFELNPAAW CHADWIGPGR GWIDPLREAQ
AASERLAGNL TTLQQEAAEQ GRDWKMDAQQ RARERAFYER LGLDPDPGKP EARSQASAAP
PAEPGDEAEE EVNGRTSARR HPAGIPRIAR RKTA
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