Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1641 |
Symbol | |
ID | 5322499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1733657 |
End bp | 1736314 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790581 |
Product | hypothetical protein |
Protein accession | YP_001327313 |
Protein GI | 150396846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.118631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTT TTACAGGTAT CGCCACGGCA ATCGCTGGCG CGCTGTTCGG CGGTTCTGCG CTTGCCACCA GCCTGATCGG CGGCGCGCTC GCCTTCGGCG CGAAGTTTGC TGTGGGCAAG CTCACCCAGC AGAAACAGGG CAAGCAGAAG CACACGGCCG TCCAGGGCGA AATCCAGTTT GGCGGCGACG TGCCGGTCGG AACCCTCTAT GGTGTCGGCA AGACCAAGGG GCAGCGTGCC TTCTATGCCA AGTGGGACAA GGGCAACAAG CGCAATGCCG AGGTCTTCAT CCTCGCCAAC GGCTGGTGCG ACGGGCTGGA GCCGTACGTC TACATGTATG GCGAGAAATA CAATCTCGTG GCGCAGGCGA CGATCGGCAA CGAGGTCGCA CGCTATGGCG TCGAGCGCTT CATCGACGGC GACGGCAACA GCGCGATCTC GATCCGCTTC TACGACGGCC GGCCGGGTCA GGGCGTCGAC CAGCGCCTCG TCGACGTTAC GGCCAACCTC GGCAACAAGT GGAAGGCGAC CAGTAAGCTT TCGGGCATGT GCTATGTCGT CGTCGAGCGC TACTATCACC TCGAATTCTT CCGTGACGCC GGCAAGGGCA AGCCGGACAT CGATTTTGTG CTGCGCGGGC TTCGCGAATA CGACCCGCGT AAGGACTCGA CGGTTGCCGG TGGCTCCGGG ACGCAGCGGC TCACCATGCC CTCGACCTGG GTGCACACGA AAAACCCGGC CTTGCACCGG CTGAACTACC AGCTGGGCCT TCGCGCGCTG GTCTCCGGCC GCACGCTGAT CGGCGAGGGC AAGAGCCTCG GCCAGATCGA CCTCGCCACC TATTTCGTCG CTATGAACGT CTGCGACACG CTGCGGGCGA ACGGCAAGAA GACCTATGAG TGCTCGCTCT TCGTCAGCGG CGACGACGAC CACACAGAGG TGCTGAAGCA GTTTGATGAC GCGATGGCCG GCTATGGGCT TAACCGCCGC GGCCTGTCCG GCGTCATTCC CGGTGCACCG CAGATCCCGG TCAAGGATCT GACTGCGGCC GACATCCCGA TTGACCGTGC CAAGGACGTG CAGTTCCGGC CGTCGGCGTT CGAGCGCTTC AACCATCTCT CCGGCCAGTT CACCTCGATC GAGTCGATGT GGAACCCGGA GAGCCTGAAG CCGGTCTATG TGAATGCGGA CATCGCCGCC GACGGCCGGA ACCGGCAGAC GAGCATCGAT TTCCTGCAGG TGACCGATCC GGACATTGCG CAGTACCTGC TCAATATCCG CTACCGGCAG AACCGCATGG GCGGCAAGGC GACGGTTCCG GTCAGCCGTC GCTTTGGCCT CGCGGTGCAG GAAGGCGAGT GGATCACCTG GCGTGGCAAG AGCTGGCTGA TCAGTGAATG GCGGGCGGAC GAGCGGCTGC GCATCACCCT GGTGCTTTCG GAGACCAGTG CGGCGATCTA TGACGACGAC GGCATCGAGC CCGGCCCGAT CGTCGTGCCG CCGACGCCGC CGATCAATCC GTCGCTGCTC TCGACCGTGC AGAACTTCAA TGTTGCCGCC GGCATGATCA ACGGCGCGCA GGGCTATGAC ACGCCGGCGC TCGTCTTCAC CTGGACGCCG CCGCACGATC CGACGATCAC CGCCGTCCGC TTTGTCTATC AGATCGAGGG CACGACAGAG ATCTTCGAGG ATCAGTGCAC CTCACCCGAG GACGGTAGCT TCCGCACCAC GAAGAACGTC GTCTCCGGTA AGGTCTACAA TGCCCGGGCG ACGATCACGA CTGTGCCCGA CCGACTGCGC ACCTTCACGC CCTGGATGAC GACGGCACAG CCGACGGGCT TGCAGACGCT GCTGACCGGC TTGCAACAGC TGCAGGACGA TGCGCTGAAC CGCTTCAAGG AACTGCAGCA GGAGATGGAC GAATTCTTCC GGCCGCGCCT GGTCGAGCTG CTGGATGCTT TCTCACTTGA GGGTGCTGTC GGACAGATCG AGCGCCAGCA GATCGTTGCC ACCATAGGTG ATGCGCTGGC GCAGATCACC GAGGAGCGCC GGGTTCGCGT CTCCGAGAAC GAGGCGATGG CGCAGTTGCT CACCTACCTG CAGGCTAGCC TCGGCACCAC ACATGCCCGG CTGATCACCG AGGAGACCGT GCGCGCAACG ACGGACAGCG CCCTCGCAAG CTCGATCACG ACACTCGACG CTGAAGTCGA TGGCAACCTC GCCCGCTTGA TCGCCGAGGA GACCGCTCGC GCAGACGGCG ACGGCGCACT CGCGAGCAGC ATCAGCGGCG TGAGCGCCGA TTTCAACGGC CGGTTCGCAC AAGGGCTGGT GAAGTTCGAG GCGGTCGCGG CGCCGACCGG CGTTGATGCG CGTTTCTCGG TGTTGTTGCG GGCCGGGACC AACCAGAGCT TCAAGGTGTC GGGCTTCTAT GTCGAGCTTT ACACCGAAGG CGGTGTGCAG AAGTCGCGCA TGGCCGTGCA GGCAGATCAG TTCCTCGTCA CGTCAGGCAA TAACCGCCAT TACCCACTCG TCTTCGAAAA CGGCGAGTTG AAGCTGGCGA TTGCCAACAT CGGCACGGTC AATGCCGGTC TTCTTCAGTC GCTGAACGGC AAAATGAAAA TCGACCTCAA CAACGGCACG ATCGAGATCT TCAGCTGA
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Protein sequence | MAIFTGIATA IAGALFGGSA LATSLIGGAL AFGAKFAVGK LTQQKQGKQK HTAVQGEIQF GGDVPVGTLY GVGKTKGQRA FYAKWDKGNK RNAEVFILAN GWCDGLEPYV YMYGEKYNLV AQATIGNEVA RYGVERFIDG DGNSAISIRF YDGRPGQGVD QRLVDVTANL GNKWKATSKL SGMCYVVVER YYHLEFFRDA GKGKPDIDFV LRGLREYDPR KDSTVAGGSG TQRLTMPSTW VHTKNPALHR LNYQLGLRAL VSGRTLIGEG KSLGQIDLAT YFVAMNVCDT LRANGKKTYE CSLFVSGDDD HTEVLKQFDD AMAGYGLNRR GLSGVIPGAP QIPVKDLTAA DIPIDRAKDV QFRPSAFERF NHLSGQFTSI ESMWNPESLK PVYVNADIAA DGRNRQTSID FLQVTDPDIA QYLLNIRYRQ NRMGGKATVP VSRRFGLAVQ EGEWITWRGK SWLISEWRAD ERLRITLVLS ETSAAIYDDD GIEPGPIVVP PTPPINPSLL STVQNFNVAA GMINGAQGYD TPALVFTWTP PHDPTITAVR FVYQIEGTTE IFEDQCTSPE DGSFRTTKNV VSGKVYNARA TITTVPDRLR TFTPWMTTAQ PTGLQTLLTG LQQLQDDALN RFKELQQEMD EFFRPRLVEL LDAFSLEGAV GQIERQQIVA TIGDALAQIT EERRVRVSEN EAMAQLLTYL QASLGTTHAR LITEETVRAT TDSALASSIT TLDAEVDGNL ARLIAEETAR ADGDGALASS ISGVSADFNG RFAQGLVKFE AVAAPTGVDA RFSVLLRAGT NQSFKVSGFY VELYTEGGVQ KSRMAVQADQ FLVTSGNNRH YPLVFENGEL KLAIANIGTV NAGLLQSLNG KMKIDLNNGT IEIFS
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