Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1620 |
Symbol | |
ID | 5322478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1716066 |
End bp | 1716278 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640790564 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001327296 |
Protein GI | 150396829 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.246445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA AAGGCATCGT CAAGTTTTTC AACCAGGACA AGGGTTTTGG TTTCATCACG CCGGAAGGCG GTTCGAAGGA CGTTTTCGTC CACATCACCG CTGTCCAGGC CGCAGGTCTC ACCACGTTGA ACGATGGCCA GGAGGTCAGC TTCGACACGG AGCCGGATCG CATGGGCAAG GGCCCGAAGG CCGTCAACCT CCAGGCTCTC TAA
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Protein sequence | MATKGIVKFF NQDKGFGFIT PEGGSKDVFV HITAVQAAGL TTLNDGQEVS FDTEPDRMGK GPKAVNLQAL
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