Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1596 |
Symbol | |
ID | 5322454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1692903 |
End bp | 1693601 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790540 |
Product | hypothetical protein |
Protein accession | YP_001327272 |
Protein GI | 150396805 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.186177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG CCCCGGAGTC GACGGCGCAG GAAATCATCG AACACCTCCG CGCCCTCGGC TCGGACGAGA ACATCGCCGC AATGGCGCGC TTCGGTATTG CGACCGAAAA CGCCCTGGGC CTTTCGAATG TGCAGCTTCG TCGCGTCGCC CGTATGGTAA AGACCGACCA TGTCCGCGCG ATCGACCTTT GGGCCTCCGG CATCCGCGAA GCGCGCCTGC TGGCAGCGTT CACTGCGGAC TCAAAGGCGC TGACGCTCGC TGAAGCGCGG CAATGGGCGA ATGCCTGCAG CTCCTGGGAA GTGGTCGATG CGATCGCCGA CCTTTTCGTC GGAGCCCGCC TCGAGCAAGT GCTCATTCCC GAATTCGCAG CCGATGAGCG AGAATTCGTC CGCCGCCTGG CCTTCGCAAT GATCGCAACA GCCGCCGTTC ATCTGAAGAA GGAGCCGGAT TCGGCGCTGC TTGCCTGGCT GCCGCTCATC GAAGCGCATG CCGCCGACGA GCGCAATTTC GTGAAGAAGG CGGTCAACTG GGCACTCAGG CAGATCGGCA AGCGCAGCCT CGATTGCCAC GGCCCGGCCC TGGCGCTCGC GCAAAGGCTC GCGATGAGCG CGAACAGCGC GGCACGATGG ACCGGCAAGG ACGCGCTGCG CGAACTGACG AGCAGCAAGG TTCGCCAACG GCTGGACCTT CCGCATTGA
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Protein sequence | MMPAPESTAQ EIIEHLRALG SDENIAAMAR FGIATENALG LSNVQLRRVA RMVKTDHVRA IDLWASGIRE ARLLAAFTAD SKALTLAEAR QWANACSSWE VVDAIADLFV GARLEQVLIP EFAADEREFV RRLAFAMIAT AAVHLKKEPD SALLAWLPLI EAHAADERNF VKKAVNWALR QIGKRSLDCH GPALALAQRL AMSANSAARW TGKDALRELT SSKVRQRLDL PH
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