Gene Smed_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1596 
Symbol 
ID5322454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1692903 
End bp1693601 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID640790540 
Producthypothetical protein 
Protein accessionYP_001327272 
Protein GI150396805 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.186177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTG CCCCGGAGTC GACGGCGCAG GAAATCATCG AACACCTCCG CGCCCTCGGC 
TCGGACGAGA ACATCGCCGC AATGGCGCGC TTCGGTATTG CGACCGAAAA CGCCCTGGGC
CTTTCGAATG TGCAGCTTCG TCGCGTCGCC CGTATGGTAA AGACCGACCA TGTCCGCGCG
ATCGACCTTT GGGCCTCCGG CATCCGCGAA GCGCGCCTGC TGGCAGCGTT CACTGCGGAC
TCAAAGGCGC TGACGCTCGC TGAAGCGCGG CAATGGGCGA ATGCCTGCAG CTCCTGGGAA
GTGGTCGATG CGATCGCCGA CCTTTTCGTC GGAGCCCGCC TCGAGCAAGT GCTCATTCCC
GAATTCGCAG CCGATGAGCG AGAATTCGTC CGCCGCCTGG CCTTCGCAAT GATCGCAACA
GCCGCCGTTC ATCTGAAGAA GGAGCCGGAT TCGGCGCTGC TTGCCTGGCT GCCGCTCATC
GAAGCGCATG CCGCCGACGA GCGCAATTTC GTGAAGAAGG CGGTCAACTG GGCACTCAGG
CAGATCGGCA AGCGCAGCCT CGATTGCCAC GGCCCGGCCC TGGCGCTCGC GCAAAGGCTC
GCGATGAGCG CGAACAGCGC GGCACGATGG ACCGGCAAGG ACGCGCTGCG CGAACTGACG
AGCAGCAAGG TTCGCCAACG GCTGGACCTT CCGCATTGA
 
Protein sequence
MMPAPESTAQ EIIEHLRALG SDENIAAMAR FGIATENALG LSNVQLRRVA RMVKTDHVRA 
IDLWASGIRE ARLLAAFTAD SKALTLAEAR QWANACSSWE VVDAIADLFV GARLEQVLIP
EFAADEREFV RRLAFAMIAT AAVHLKKEPD SALLAWLPLI EAHAADERNF VKKAVNWALR
QIGKRSLDCH GPALALAQRL AMSANSAARW TGKDALRELT SSKVRQRLDL PH