| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1575 |
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| Symbol | |
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| ID | 5322433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1672262 |
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| End bp | 1674157 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790519 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327251 |
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| Protein GI | 150396784 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00305451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.645388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTA TCAAGTCGGC GGCGGTTGTC GCGCTCATGA GCGGGTGTGC GGTTGCAGCC
ATGGATGTGC AGCCGGCGTC CGCGCTCACC TTCATGGACT TCATCCGCGG AGGCAAGAAG
CGCGACGTGC AGGAACAGGT GCAGCCCCGC CAGCAGCGTC CGGGCGTGGA TATGTTTGCT
CCGCAACAAT TGGAGCAGAG GGCAGCAAAG CCGCCGCGCA TCACCGGTCC TCGGTACTAC
ACCTATAAGG CGGATGCGCT CCGCCGGATT GCAACGGACC GGTTGCTCGA TCCCGTGGTC
ACCGGCTCGG TGGCCAACGG AGCGCTGCCG CCGATGGTGC GTACGCCGCT TTCCGAGGTG
CGCCAGTTTC TGCCGCAGAT CGATGTGCGC GCCCCGGGCG AGGTCGCAAA AGCGATCGAG
ACCTTCTACG GCACACGAAC TGATTTCCTC TGGATCGATG GCGTGGGCGT CAACGGCCGC
GCCAAGGCGG CGCTTGCTGC CCTGTCCGCC GCCGCGAAGG TCGGCCTGGA CCCGCGCGAT
TATGCCGTCG CTGTCCCGCC GGAGGATTTC GATCGCGGCG ACATGATCGC CCGCGAAAAG
GATCTGGTGC GGTTCGAGAT CGCGTTGTCC GCAGCCATGC TCACCTATGT TCAGGACACG
GTGCGCGGCC GGATCGATCC GAACCGGATT TCCGGCTATC ACGACTTCAA ACGGAAGAGC
GTCGATCTTC TTGCCTTTCT GGAGAAGATC GAGGCATCCG GTGACGTTGC CGCGCTCATC
GAAAGCCGGA ATCCCAAGAG CGCTCAGTTC GAGGCATTGA GGCAGGAACT CGAACGACTT
CGGACCCAGG TCGAAGCGAC GCCTCGGGTC GAGATCGCAC CGGGGACGCT GTTGAAGCCC
GGCGAGAGCA ATCCGGAACT CGCCAATGTG ATCGCCGGGA TCAAGCTTAA AGCCTCGGAT
GCGCTGAAGA CGGAGCATGC AGTCGTGCTC GCCGCCTATG GCGGGACGCC GGATTACACG
CCCGAGCTTG TGCCTGTCGT CGAAGCCTTC CAGAAGGAAC ATGGCCTCAA GGCGGACGGC
ATTGTCGGCC AGGCGTCGAT ACGCGCTATC ACCGGCGGTG ACACGATCGG GGAGAAGATC
AGAAAAATCG AAATCGCGAT GGAGCAGGCG CGCTGGTTGC CCGACGGGCT CGGCGACCGC
TATGTCTTCA TCAACCAGCC GGCCTTCACC GCCTCCTATA CGGAGCAGGG CGCCGAGCAG
TTCTCCATGC GTGTCGTCGT CGGCTCCAAG GCCAATCAGA CCTACTTCTT CCAGGACGAG
ATTCAGACGG TCGAAGTCAA TCCATATTGG GGCGTTCCGC AGTCGATCAT CGTCAATGAG
ATGCTGCCGA AGCTCAGAAG CGACCCCGGT TACCTTGACC GCATGGGCTA CCAGGTGGAA
GTCGGTGGCC GGGTCGTTTC TTCGACCGCT GTGAACTGGT ACGGCTCGAC GAACTCCATC
GCGGTGCGCC AACCGCCGAG TAGCGACAAT GCATTGGGTG AACTCAAGAT TCTATTCCCC
AACGCCCACG CGATCTACAT GCACGATACG CCGTCGAAGA GCTTTTTCAA GCGCGATCAG
CGGGCTCTCA GCCATGGCTG CGTGCGCCTC GCCGACCCGC GCCGCATGGC GGCGGCCGTA
CTTGGCGTGA GCGTCGACGA GGTCGGCGAA GAGATATCCG GCGGTCGCAA CAAGGCACTC
CCGGTATCCG CCAAGGTCCC GGTCTATGTC TCCTACTTCA CCGCCTGGCC GAACAAGGAC
GGAACCGTCG AGTATTTCAA TGACGTTTAC GAGCGCGACA TGTACGTGAA CCGCGCCTTC
GAGGCGACGC GCAAGGCGCG GCACGCGGAA GGGTGA
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| Protein sequence | MRVIKSAAVV ALMSGCAVAA MDVQPASALT FMDFIRGGKK RDVQEQVQPR QQRPGVDMFA
PQQLEQRAAK PPRITGPRYY TYKADALRRI ATDRLLDPVV TGSVANGALP PMVRTPLSEV
RQFLPQIDVR APGEVAKAIE TFYGTRTDFL WIDGVGVNGR AKAALAALSA AAKVGLDPRD
YAVAVPPEDF DRGDMIAREK DLVRFEIALS AAMLTYVQDT VRGRIDPNRI SGYHDFKRKS
VDLLAFLEKI EASGDVAALI ESRNPKSAQF EALRQELERL RTQVEATPRV EIAPGTLLKP
GESNPELANV IAGIKLKASD ALKTEHAVVL AAYGGTPDYT PELVPVVEAF QKEHGLKADG
IVGQASIRAI TGGDTIGEKI RKIEIAMEQA RWLPDGLGDR YVFINQPAFT ASYTEQGAEQ
FSMRVVVGSK ANQTYFFQDE IQTVEVNPYW GVPQSIIVNE MLPKLRSDPG YLDRMGYQVE
VGGRVVSSTA VNWYGSTNSI AVRQPPSSDN ALGELKILFP NAHAIYMHDT PSKSFFKRDQ
RALSHGCVRL ADPRRMAAAV LGVSVDEVGE EISGGRNKAL PVSAKVPVYV SYFTAWPNKD
GTVEYFNDVY ERDMYVNRAF EATRKARHAE G
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