| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1563 |
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| Symbol | |
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| ID | 5322421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1657242 |
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| End bp | 1658063 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790508 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001327240 |
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| Protein GI | 150396773 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.17236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG ACCACGCCCG TCTGGACGGG AAAATCGCAA TTGTGACCGG CGGAACGCAA
GGGCTCGGTG CCACGATTGC CGCACTCTTA GCAGAGCGTG GCGCCGAAGG GCTCGTCATT
TGCGGACGTA ACGCGGCGAA GGGCGAGGCG AAAGCTGCCG AGATCGCGGC TTCGACGGGT
GCGAAGGTCA TTTACGTACC GGCGGATCTC GAGCGAGTGG ACGATGCCCG TGCCGTCGTT
GCGGCCTGCG ATCGCAGCTT CGGCCGTGTC GATGCGCTGG TCAACGCCGC AGCAATCACG
GATCGGGGTA CGATCCTCGA CACCAGCCCG GAGCTGTTCG ACCGGATGTT CGCGGTCAAT
GTGCGGGCGC CGTTCTTCCT CATGCAGGAG GCGGTTAAAG TAATGCGGCG CGAGAAAACC
GAGGGCACGA TCGTCAACAT CGGTTCGATG TCGGCGAAGG CGGGCCAACC TTTCATAGCC
GCCTATTGTG CATCCAAGGG TGCGCTGGAA ACCCTGACCA AAAACACGGC CTACGCGGTC
CTGCGCAACC GGATCCGCGT CAACGGTCTG AACATAGGCT GGATGGCATC CGAAGGCGAG
GATCGGATCC AGCGCGAATA TCACGGTGCG CCGGCGAATT GGCTGGAGGC AGCGGCGTCG
AGCCAACCCT TTGGTCGCCT CGTCGATCCC GCCGAAGTCG CACGCGCAAG CGCCTATCTT
TCATCGGCGG AATCCGGACT CATGACGGGT TCCGTCATCT GCTTCGATCA GTCGATCTGG
GGCGCCTATG ACGCCTCGCC TCATCCGCAA GCGCCGCTCT GA
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| Protein sequence | MSTDHARLDG KIAIVTGGTQ GLGATIAALL AERGAEGLVI CGRNAAKGEA KAAEIAASTG
AKVIYVPADL ERVDDARAVV AACDRSFGRV DALVNAAAIT DRGTILDTSP ELFDRMFAVN
VRAPFFLMQE AVKVMRREKT EGTIVNIGSM SAKAGQPFIA AYCASKGALE TLTKNTAYAV
LRNRIRVNGL NIGWMASEGE DRIQREYHGA PANWLEAAAS SQPFGRLVDP AEVARASAYL
SSAESGLMTG SVICFDQSIW GAYDASPHPQ APL
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