Gene Smed_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1550 
Symbol 
ID5322408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1642633 
End bp1642911 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content63% 
IMG OID640790495 
Producttransport-associated 
Protein accessionYP_001327227 
Protein GI150396760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.178686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.143106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTA AAAAACGAAC ATTCTTCGGC GATGAGCCCC AGAGGCTGCC TGCGGAAGAT 
CCAGCCGAAC TCGAGCGCCG AGTCGCTCAC TGTCTCGCGG TCGCACCGGG CCTCGACGCC
GTAGCGGTCA CGGTAACTGG CTCGGGCACC ACGATTCTGC TCGGGGGTAC TGTGGCGACC
GAAGAAGAGA TCGCCCGCGC CGAAGAGGCG GCCCGATCTG TTGAAGGGGT CGCCGACGTC
GTCAATCGCA TCGAACTCGC GAAAGTCGGG ACCGGGTGA
 
Protein sequence
MIFKKRTFFG DEPQRLPAED PAELERRVAH CLAVAPGLDA VAVTVTGSGT TILLGGTVAT 
EEEIARAEEA ARSVEGVADV VNRIELAKVG TG