Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1524 |
Symbol | |
ID | 5322382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1609421 |
End bp | 1610350 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790469 |
Product | indigoidine synthase A family protein |
Protein accession | YP_001327201 |
Protein GI | 150396734 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2313] Uncharacterized enzyme involved in pigment biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0175731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC CCTCCTCCTC GTCCCTGACG ATCGACTATT CAGACGAAGT CGCGGCTGCC AAGCAACGCG GTGCGCCGAT CGTGGCCCTG GAATCGACGA TCATCACGCA TGGCATGCCC TATCCCGGCA ATCTCGACAT GGCCCGCAGC GTCGAGACGA TCATCCGTGA ACAGGGCGCC GTGCCGGCGA CCATTGCCGT CATCCACGGG GTCCTGCATA TCGGCCTCGA CGGCGCCGAG CTGGAGGCGC TGTCGACGAC GCAGGGCGCG ATGAAGCTTT CACGCGCCGA TCTTGCCTTT GCCATTGCCG AACGCCGTAC AGGCGCCACG ACAGTTGCCG CAACCATGAT CGCCGCCGCC CGCGCCGGCA TCAGGGTTTT CGCCACAGGC GGCATTGGCG GCGTTCACCG CGGCGCCGAG CAGAGCTTCG ACATATCGGC GGATCTCGAC GAACTCGCGC GAACCGGCGT GATCGTCGTC TGCGCGGGTG CCAAGGCCAT CCTGGATATT CCCAAAACGC TCGAGGTTCT TGAAAGCCGC GGCGTGCCGG TCGTAACTTA TGACAGCGAG AACTTCCCGG CCTTCTGGTC GCGCGAATCC GGCCTCAAGA GCCCGCTGAT GCTGAACAGC CCGGCGGCGA TCGCCAGTTT CCAGCGAACG CGCGAACTGC TCGGAATCGA AGGGGGGATG CTTGTCGCCA ATCCGGTGCC CGAAGAAAGC GAAATCCCGC GCGAGGAGAT GGAGATCTAT ATCACCCGCG CGATCGACAA CGCGGCAAGC GAAGGAATTA CCGGCAAGGC TGTCACGCCG TACCTGCTCG ACAACCTCTT CCGCTTGACG GACGGTCGCA GCCTCGAAAC CAATATTGCG CTGGTCGAAA ACAATGCACG CCTCGCTGCC GAAATCGCTG TCGCTCTTGC GATGAAGTAA
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Protein sequence | MTNPSSSSLT IDYSDEVAAA KQRGAPIVAL ESTIITHGMP YPGNLDMARS VETIIREQGA VPATIAVIHG VLHIGLDGAE LEALSTTQGA MKLSRADLAF AIAERRTGAT TVAATMIAAA RAGIRVFATG GIGGVHRGAE QSFDISADLD ELARTGVIVV CAGAKAILDI PKTLEVLESR GVPVVTYDSE NFPAFWSRES GLKSPLMLNS PAAIASFQRT RELLGIEGGM LVANPVPEES EIPREEMEIY ITRAIDNAAS EGITGKAVTP YLLDNLFRLT DGRSLETNIA LVENNARLAA EIAVALAMK
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