Gene Smed_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1512 
Symbol 
ID5322370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1593397 
End bp1594278 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content59% 
IMG OID640790459 
ProductC32 tRNA thiolase 
Protein accessionYP_001327191 
Protein GI150396724 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0994249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.8984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG CACAATCATC CTTGAACGAA ACGACGGAGA TCTCCGCCGG CGAAGAGGCC 
GTCTTCGACG CCGGTGCCCA TCCGCTTTTC TCCCGCATGC CGTCCTCCGT CTCCTTCAAC
AAGCTGCGCA AGCGCCTGCT CAGGCAGGTG CGTCAGGCAC TTGACGACTT CGGCATGCTC
AAGGGCTCCA AGCGATGGCT CGTCGGCGTG TCGGGCGGCA AGGACAGCTA TAGCCTTCTT
GCACTCCTGA TGGATCTGAA GTGGCGTGGT CTGCTTCCCG TCGAGCTTGT GGCCTGCAAT
CTGGACCAGG GACAGCCGAA TTTTCCGAAG CATGTGTTGC CCGACTATCT TCAGTCGATA
GGGGTCAGGC ATCGCATCGA ATACCGCGAC ACCTATTCGA TCGTAAAGGA GAAGGTGCCG
GCGGGTGCCA CCTATTGTTC GCTCTGTTCG CGGCTTCGGC GGGGCAATCT TTACCGCATT
GCCCGGGAGG AGGGTTGTGA CGCTTTGGTG CTTGGCCATC ACCGCGAGGA CATCCTCGAA
ACGTTCTTCA TGAACTTTTT CCATGGCGGG CGCCTCGCGT CGATGCCGGC GAAGCTTTTG
AACGACGAGG GCGACCTGAT GGTTCTTCGG CCGCTTGCCT ATGCGGCGGA AGACGATATC
GCGAAATTCG CCGCTGCCAT GGAGTTTCCG ATCATCCCCT GTGATCTTTG CGGTTCGCAG
GACGGGCTCG AGCGCAACGC GATGAAGGCG ATGCTTTCCG ATATCGAGCG GCGCATGCCG
GGCCGCAAGG ATACGATGCT TCGCGCGCTC GGACATGTGA ATGCCTCGCA TCTGCTCGAC
CCGAAACTTT TCGATTTCCA GTCCCTCTCT CCGGAGCCTT AA
 
Protein sequence
MELAQSSLNE TTEISAGEEA VFDAGAHPLF SRMPSSVSFN KLRKRLLRQV RQALDDFGML 
KGSKRWLVGV SGGKDSYSLL ALLMDLKWRG LLPVELVACN LDQGQPNFPK HVLPDYLQSI
GVRHRIEYRD TYSIVKEKVP AGATYCSLCS RLRRGNLYRI AREEGCDALV LGHHREDILE
TFFMNFFHGG RLASMPAKLL NDEGDLMVLR PLAYAAEDDI AKFAAAMEFP IIPCDLCGSQ
DGLERNAMKA MLSDIERRMP GRKDTMLRAL GHVNASHLLD PKLFDFQSLS PEP