| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1478 |
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| Symbol | |
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| ID | 5322336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1564858 |
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| End bp | 1566357 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790426 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001327158 |
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| Protein GI | 150396691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0142934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00960181 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACCAATT TCGCTGACCT TGGCTTGAGC CAGAAAGTTC TTTCCGCAGT TACCGACGCG
GGCTACACGA TACCGACACC GATCCAGATT GGTGCAATCC CGCCGGCGCT TCAGCGCCGC
GACATTCTCG GCATCGCCCA GACCGGCACC GGCAAGACCG CATCCTTCGT GTTGCCGATG
TTGACCCTTC TGGAAAAAGG ACGCGCCCGC GCACGGATGC CGCGCACGCT TATACTTGAG
CCGACGCGCG AGCTCGCGGC CCAGGTCGCC GAGAATTTCG ACAAATACGG CAAGAATCAC
AAGCTTAACA TCGCGCTTCT GATTGGTGGC GTTTCCTTCG ACGAGCAGGA CCGCAAGCTC
GAGCGCGGCG CCGACGTGCT GATTTGTACG CCCGGCCGGC TGCTCGACCA CTGCGAGCGT
GGCAAGCTTT TGATGTCAGG CGTCGAAATT CTTGTCATCG ACGAGGCTGA CCGAATGCTC
GATATGGGAT TCATTCCTGA TATCGAACGT ATCGCGAAGC TCATTCCCTT TACACGGCAG
ACCTTGTTCT TCTCAGCCAC GATGCCGCCC GAAATCCAGA AGCTTGCGGA TCGCTTTCTG
CAGAATCCGG AGCGGGTCGA AGTGGCACGC CGGTCATCGA CAGCCATAAC GGTCACGCAG
CGTCTCGTGG CAGCGCACGG CAAGGACTAC GAAAAGCGAG CCGTCCTCCG TGAGCTCATT
CGTTCCCAGG AAGACCTGAA GAACGCGATC ATCTTCTGCA ATCGCAAGAA GGATGTCGCC
GAGCTTTTCC GCTCGCTCGA CCGTCATGGC TTCTCGGTCG GCGCGCTGCA CGGCGACATG
GATCAGCGGT CGCGCATGGC CATGCTTGCC AATTTCAAGG ACGGCAACAT CAAGCTGTTG
GTCGCCTCCG ATGTCGCGGC GCGCGGGCTC GACATTCCCG ACGTGAGCCA TGTATTCAAT
TTCGACGTGC CGATCCATGC GGAAGACTAT GTCCATCGCA TCGGACGAAC CGGGCGCGCT
GGCCGTTCCG GTGCCTCTTT CACAATCGTC ACGAAGCGCG ACATCAAGTT CGCCGACGCC
ATCGAAAAGC TGATCGGCCA GGAAGTCGAA TGGCACAATG GCGACCTTTC GGAACTGCCC
GAACCGATGG AAAGTCACGA CAGCCGTCGT GACCGCGGCA GCGACGGGCG CAAGGATCGG
AAGAGGGAGC GACCCGTGAA GACCCGCTCC GATCACAAAG CTGTCACGGC CGTAGACAAT
AATACTGAAG AACTCGAAAC AGTCCCGGAA AGGGTCGACA CGGTGAAGAT CGAACGCAAT
GCCGAGAGCA AGGATCGCCA TAACGGCCGC AGCGACCGTC CTGGCCGCGC GCAGAATGCG
GCTAATGACG ACAATCGCGA TCGTCGGCAG CGTCACCGCC GCGACCATGA CGACGGCCCT
ACGCCCGTGG GTTTCGGTGA TGACATCCCA GCCTTCATGC TGATCGTCGG CAAGGCCTGA
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| Protein sequence | MTNFADLGLS QKVLSAVTDA GYTIPTPIQI GAIPPALQRR DILGIAQTGT GKTASFVLPM
LTLLEKGRAR ARMPRTLILE PTRELAAQVA ENFDKYGKNH KLNIALLIGG VSFDEQDRKL
ERGADVLICT PGRLLDHCER GKLLMSGVEI LVIDEADRML DMGFIPDIER IAKLIPFTRQ
TLFFSATMPP EIQKLADRFL QNPERVEVAR RSSTAITVTQ RLVAAHGKDY EKRAVLRELI
RSQEDLKNAI IFCNRKKDVA ELFRSLDRHG FSVGALHGDM DQRSRMAMLA NFKDGNIKLL
VASDVAARGL DIPDVSHVFN FDVPIHAEDY VHRIGRTGRA GRSGASFTIV TKRDIKFADA
IEKLIGQEVE WHNGDLSELP EPMESHDSRR DRGSDGRKDR KRERPVKTRS DHKAVTAVDN
NTEELETVPE RVDTVKIERN AESKDRHNGR SDRPGRAQNA ANDDNRDRRQ RHRRDHDDGP
TPVGFGDDIP AFMLIVGKA
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